Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01946 ATGGGTATCTCTCGTGATTCCATGCACAAAAGGCGTGCCACTGGAGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGGAGGCAACCAGCAAACACTAAGCTGTCAAGCAACAAGACAGTGAGGAGGATTAGGGTTCGAGGTGGGAATGTTAAGTGGCGTGCTTTGAGGCTTGATACTGGAAATTATTCTTGGGGCAGTGAAGCCGTGACCCGGAAAACTAGAATTCTCGATGTGGTGTACAATGCATCTAATAATGAGCTGGTTCGTACTCAGACATTGGTCAAGAGTGCGATCGTTCAGGTAGATGCAGCACCTTTCAAGCAGTGGTATCTCCAACATTACGGTGTTGACATTGGTCGCAAGAAGAAGACTGCAACTTCTGCCAAGAAGGAAGGAGAGGAAGGTGAAGCTGCAACTGAGGAAGTGAAAAAGAGCAAACATGTTTTGAGAAAGATCGAGAAGCGTCAGCAGAATCGAACACTGGATTCTCATATCGAAGAACAATTTGGAGGAGGTCGTCTATTGGCTTGCATCTCCTCTCGCCCTGGTCAATGTGGTCGTGCTGATGGGTATATTTTGGAGGGTAAAGAATTGGAATTCTACATGAAGAAGATTCAGAGGAAGAAGGGCAAGGGTGCTGGTGCTGCCTAA 663 0.4691 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTATSAKKEGEEGEAATEEVKKSKHVLRKIEKRQQNRTLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01946 220 NCBIfam ribosomal protein eS8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
Accr3g01946 220 Pfam Ribosomal protein S8e 5 197 IPR022309 -
Accr3g01946 220 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Accr3g01946 220 MobiDBLite consensus disorder prediction 11 26 - -
Accr3g01946 220 CDD Ribosomal_S8e_like 5 197 - -
Accr3g01946 220 FunFam 40S ribosomal protein S8 32 161 - -
Accr3g01946 220 Gene3D - 32 161 - -
Accr3g01946 220 Gene3D - 162 215 - -
Accr3g01946 220 FunFam 40S ribosomal protein S8 162 215 - -
Accr3g01946 220 MobiDBLite consensus disorder prediction 1 41 - -
Accr3g01946 220 PANTHER 40S RIBOSOMAL PROTEIN S8 1 215 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01946 Accr-Chr3 28308292 28310889 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01946 1 220 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.068 1.15e-128 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01946 K02995 - rcu:8277586 399.053