Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01937 ATGGAGAAAACTCAAGCTTGCCTCATCCTCCTCTTCCTTCTTCTTCCTCCTCATCATCGCTTTTTCACAGTCTGTGCAGGTCAACCAAGTCCTTCTCCTGGAAACAATAAATCTGCAGGAAGTTCCAGCTGGAAAAAACTAGCACCAATACTAGTTGGTGTTGGATTGTTTTTGGCGGCTGCGTTCTTTATGTTGAAGAGGATGTCTAAGGTAGGTGAAGAGATGGAGAACATGGAAACCCATAGAGAGTTTTCGGGGAATACGCTGAAAGGGGTCATTATTACAACAGAAGATGTTGAGAAGCTGAAGAAGAGAGATTCAGAGCTTGTTTTCTTTGTTGAAGAGCATGAGAGGTTCACACTTGAGGACTTGCTCCAAGCCACAGCTGATGTAAGAAGTGAGAGCTTTAGCAGCAGCTTGTATAAGGTAATACTGAAGAATAATATGCATTATGCAGTGAAAAGGCTAAGGAATTTGCAGGTAACTTCTGATGAATTTGGAGAAACACTAAGGCAAGTAAGTAACCTGAAACATCCAAATATTCTTCCCCTTGTTGGCTATCGATCGACTAGTGAAGAAAAACTTCTGATTTATAAATATCAAAGCAATGGAAGTCTGCTTTTACTTCTAAAAGAATACTTGCAAGGTAGAAAAGAATTCCCATGGAAACTGAGACTATCTATAGCAGCTCGAATTGCAAGGGGTTTAGAGTTCATGCATCAGAAGATGGAAGGAAGAGAAACAATTCCTCATGGAAACCTCAAGCTGTCAAATATCCTTCTTAATAACAACTATGAGCCTCTTATAAGTGAGCATGGACTATCAAAATTGATTGACCCTAACAGGTCATTCTTCTTTTCTTCTCATGGATACACCGCCCCGGAAAATAGTTTAACCGAGAAAAGTGATGTTTATAGCTTTGGGGTGATCTTGCTCGAGCTACTAACGGGAAAGAGCGTGGAAATAAACAACATAGACCTACCTAGATGGGTCCAATCCATGGTGAGAGAGGAATGGACAGGGGAGGTGTTTGATAAGGCGCTTACAGAAAGCGAGTATCAGTGGGTGTTTCCCGTGCTGAACATCGCCCTTTTGTGTGTGTCACGCGTCCCCAAGAACCGACCAACCATGGAAGAAGTCTTGGAGAAGATAGATAAAGTCTTGCAGGAGTATGAATATGTTCAGATGCTGCAGCATGAACATGATCCAACAAGAAGTTGCAACAATAATGGAAGCCATGATGATTGTTGTTCATTGCACAATATCATACCGGAAACTTGGGATTCTCCTGGATCAAATTACTGA 1305 0.4161 MEKTQACLILLFLLLPPHHRFFTVCAGQPSPSPGNNKSAGSSSWKKLAPILVGVGLFLAAAFFMLKRMSKVGEEMENMETHREFSGNTLKGVIITTEDVEKLKKRDSELVFFVEEHERFTLEDLLQATADVRSESFSSSLYKVILKNNMHYAVKRLRNLQVTSDEFGETLRQVSNLKHPNILPLVGYRSTSEEKLLIYKYQSNGSLLLLLKEYLQGRKEFPWKLRLSIAARIARGLEFMHQKMEGRETIPHGNLKLSNILLNNNYEPLISEHGLSKLIDPNRSFFFSSHGYTAPENSLTEKSDVYSFGVILLELLTGKSVEINNIDLPRWVQSMVREEWTGEVFDKALTESEYQWVFPVLNIALLCVSRVPKNRPTMEEVLEKIDKVLQEYEYVQMLQHEHDPTRSCNNNGSHDDCCSLHNIIPETWDSPGSNY 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01937 434 Pfam Protein tyrosine and serine/threonine kinase 146 383 IPR001245 GO:0004672|GO:0006468
Accr3g01937 434 PANTHER OS05G0588300 PROTEIN 32 389 - -
Accr3g01937 434 SUPERFAMILY Protein kinase-like (PK-like) 138 382 IPR011009 -
Accr3g01937 434 Gene3D Phosphorylase Kinase; domain 1 92 200 - -
Accr3g01937 434 ProSiteProfiles Protein kinase domain profile. 125 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01937 434 Gene3D Transferase(Phosphotransferase) domain 1 202 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01937 Accr-Chr3 28001761 28004188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01937 108 387 Receptor kinase-like Gene Family AT1G48480 38.591 3.84e-56 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr3g01937 PK_Tyr_Ser-Thr 1.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01937 - - aprc:113874587 508.449