Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01934 ATGGAGGCTACTAGCCACTCGGCTTCGCAGCTCCAGCCTTTGGATTCCGATGATGTAGCATTTAACGATCTGAATCAGCTCGGCTCGCGGCAGAATTCGGACGTCGGAGCATCTGCCTCTGGAAGTGGAGGTGCCAGGTATAAGCTGATGTCGCCGGCGAAGCTTCCGATCTCGAGGTCGCCCTGTATTACGATACCTCCCGGGCTGAGTCCGACATCGTTTCTGGAGTCCCCGGTCCTTCTGTCCAACATGAAGGTGGAGCCCTCGCCAACAACAGGGTCCCTCAGTAAGCCTCAACCAGTGTTTGGTTCTGTTGCTTCTACAACATTTCCTGTAACAACCATATCCTCAAACACCAATTCTGTTGATGACAGAAAATCTGACTTCTTTGAGTTTAAACCACGCAGTAGCGCAAATATGGTTCCTGCTGATTTTACCAACCATGTGATAAGTGAACAGTCCATGCAAATAGATGGTCCAGGGCATGTTCAATCATATGCCTCATCAACATTAGTCAAGACTGAGACAGCAGTGCCATCAAATAAATTGTGTCTATCATCGACTGTTCAAATGGTTAGTTCAGGTGCTAATGCTCATACTGAAGTTGATCCAGATAAACTTAACGAGAAAGGCAATGCTGCCTCTGGGTTTCAAGCATCTTTAGTTGATGGTAGAGGCAATGGCCTTCCAGTTGCAGCCGAGAGAATATCAGATGATGGATACAATTGGCGAAAATATGGTCAGAAACATGTTAAGGGATGTGAATTTCCGCGCAGCTACTACAAGTGCACACACCCAAACTGTGAAGTAAAAAAGTTATTTGAACGCTCTCATGATGGGCAAATAACAGAGATAATTTATAAGGGAAAACATGATCATCCTAAACCTCAACCAAGTCGCCGACACTCTGCTGGTACTATGATGTCTATACAAGAAGAGAGAACTGACAAAGCTTTGTCAGCCAACCAAGATGAGAAATCATCCAATATGCATGCTCTGGTGCCTCACATTGCTGAACCCAACTGTAACCCAGATCAATCTCCCATACATGCTGATAGTCCAGAGGGTATTGGGTTAGTGTCAAATAGGGTTAATGATGAGGTTGATGATGATGATGATCCCTTCTCAAAGAGAAGCAAAATGGACACTGGAATTGCTGACATTACTCCTATAGTTAAGCCAATCCGGGAGCCACGGGTTGTTGTACAAACACTAAGTGAGGTTGATATATTGGATGATGGTTACCGCTGGCGTAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACAAATGTCGGTTGCCCTGTTAGAAAACACGTGGAGAGGGCATCTCATGATCCCAAAGCAGTAATAACCACCTATGAGGGCAAACACAATCATGACGTGCCTACTGCGAGGAGCACTAGCCATGACACAGCAGGACCAACAGTTGCTGCTGGAGGGCAGACAAGAATTAGACCTGAGGAAAGTGATAATATTAGCCTTGACCTTGGGATGGGCATTAGATCAGCTGCTGAAAATATACCGAACAGACAAGGCCAATTGCTGCTCTCGGAATTTGGTAACAGCCAAACGCACCCCAGCAATTCCAGTCTCAAATTTGTTCATAACACCCCTCCTCCAGCATACTTCAGTGTTCTTAATAACGGCTCAAATCCGTATGGTTCTAGAGAAAATCTGAGTGATGCTCCATCTTTGAACCATTCCTTTATCCATGCCCTCCGAGCATGGGAAGAATACTAA 1767 0.4561 MEATSHSASQLQPLDSDDVAFNDLNQLGSRQNSDVGASASGSGGARYKLMSPAKLPISRSPCITIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLSKPQPVFGSVASTTFPVTTISSNTNSVDDRKSDFFEFKPRSSANMVPADFTNHVISEQSMQIDGPGHVQSYASSTLVKTETAVPSNKLCLSSTVQMVSSGANAHTEVDPDKLNEKGNAASGFQASLVDGRGNGLPVAAERISDDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGKHDHPKPQPSRRHSAGTMMSIQEERTDKALSANQDEKSSNMHALVPHIAEPNCNPDQSPIHADSPEGIGLVSNRVNDEVDDDDDPFSKRSKMDTGIADITPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSTSHDTAGPTVAAGGQTRIRPEESDNISLDLGMGIRSAAENIPNRQGQLLLSEFGNSQTHPSNSSLKFVHNTPPPAYFSVLNNGSNPYGSRENLSDAPSLNHSFIHALRAWEEY 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01934 588 FunFam WRKY transcription factor 229 297 - -
Accr3g01934 588 MobiDBLite consensus disorder prediction 22 39 - -
Accr3g01934 588 MobiDBLite consensus disorder prediction 289 359 - -
Accr3g01934 588 ProSiteProfiles WRKY domain profile. 232 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01934 588 SUPERFAMILY WRKY DNA-binding domain 403 471 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g01934 588 Gene3D WRKY domain 398 464 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g01934 588 MobiDBLite consensus disorder prediction 467 490 - -
Accr3g01934 588 SUPERFAMILY WRKY DNA-binding domain 235 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g01934 588 FunFam WRKY transcription factor 33 398 464 - -
Accr3g01934 588 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 78 507 IPR044810 GO:0003700
Accr3g01934 588 SMART WRKY_cls 411 470 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01934 588 SMART WRKY_cls 237 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01934 588 MobiDBLite consensus disorder prediction 302 329 - -
Accr3g01934 588 MobiDBLite consensus disorder prediction 1 16 - -
Accr3g01934 588 ProSiteProfiles WRKY domain profile. 406 471 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01934 588 MobiDBLite consensus disorder prediction 1 45 - -
Accr3g01934 588 Pfam WRKY DNA -binding domain 412 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01934 588 Pfam WRKY DNA -binding domain 238 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01934 588 Gene3D WRKY domain 231 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01934 Accr-Chr3 27943566 27949535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01934 50 577 WRKY Transcription Factor Family AT4G26640 54.953 2.03e-175 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr3g01934 WRKY 3.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01934 - - gmx:100781491 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01934 3 27943566 27949535 Accr3g01934 3 27943566 27949535 ECH