Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01932 ATGCAGGCATCTCAGAAACATGAGATTTGCTATGGCTCTGTGCAAACTCTGGAATCTTATCATTCTTCTTTAGCTCAAACCATAGAATCTTGCTCTACAAGTAACAGTAATCCTGACCTTAGTTCTCCATCAGCCAATGGAAGCCCAGTATTAAACTCATACATGTTGAAGACACAAAATTCTTTTGAATCTTGCTTGACACAGACACAAGATATTGATGATCTTAGCCACAAGCTACACGAGCTGGAGACTGCGATGTTGGGACCTGATGAAGAAATTTCAGTCGCATATGATGCTGATGCAGTCATGTATGAAGCAGAGAGATGGAAGAAGACAACAGAGATGATATCTAGAGGAGACTTGAAAGAGATGCTTTGTGCTTGTGCACATGCAATGGAGGAGAATGATATGGAGACGAGCGAGTGGCTCATATCTGAGCTGCGACAAATGGTGTCAATTTCTGGAAATCCTCTACAGCGTTTAGGTGCATATGCGTTAGAGGCACTTGTGGCTAGATTGTCTTCTTCAGGAAGCAAAATATGCAAATCCTTAAAATGCAGAGAACCTACTGCTTCTGAACTCCTTTCTTATATGAATAAATTATATGAAATATGCCCATACTTCAAATTTGGCTATTTATCAGCAAATGGGGTGATTGCTGATGCCATGAAGCAAGAGAATAAGGTTCACATAATTGATTTTCAGATTAATCAGGGCATCCAGTGGGTGAGTCTCATTCGAGCTCTTGCCTGCCGACCAGGAGGGCCCCCGACGATTAGAATCACAGGTGTTGATGACTCCGCTTCGGCTTTTACTAGAGGAGGAGGACTTGAGATTGTGGGGAAAAGATTATCAGCACTTGCACAGTCATGTAATGTCCCATTTCAGTTCCTTGCTATGGAAGTTTCTGCATCGGATGTCGATTTCCAACACCTGAAGATTCTACCTGGTGAAGCCATTGCCGTGAACTTCACCATGATGCTACACCATCTTCAAGATGAGACAATGGAGCGTTTGTTGAGATTAGTTAATTGCTTGTGTCCCAAGGTAGTGACCCTTGTTGAGCAAGAAAGTGACACCAATCATGTCCCTTTCTACCCGCGTTTTGTTCAGACACTTAACTACTACTTGCCGGTTTTTGAATCAATTGATGATGTCATGGCAAGGGATCACAGGGATAGGATCAACGTGGAACAACATTGTCTGGCTCGAGAGATTGTGAACTTGATAGCATGTGAAGGGGAAGATAGAGTGGAACGACACGAGACTTTGGAAACTTGGAGATCACGTTTCAGAATGGCGGGGTTTGGTCCATATCCATTGAACTCATTCATTAATTTTACCATCAAGAATCTTCTGGAGGATTATTCCAAAAACTACACACTACTAGAGAAAGATGGTGCTCTATACCTTGGTTGGATGAATCATCCTCTTGTTTCTTCTTGTGCTTGGAGATGA 1458 0.4246 MQASQKHEICYGSVQTLESYHSSLAQTIESCSTSNSNPDLSSPSANGSPVLNSYMLKTQNSFESCLTQTQDIDDLSHKLHELETAMLGPDEEISVAYDADAVMYEAERWKKTTEMISRGDLKEMLCACAHAMEENDMETSEWLISELRQMVSISGNPLQRLGAYALEALVARLSSSGSKICKSLKCREPTASELLSYMNKLYEICPYFKFGYLSANGVIADAMKQENKVHIIDFQINQGIQWVSLIRALACRPGGPPTIRITGVDDSASAFTRGGGLEIVGKRLSALAQSCNVPFQFLAMEVSASDVDFQHLKILPGEAIAVNFTMMLHHLQDETMERLLRLVNCLCPKVVTLVEQESDTNHVPFYPRFVQTLNYYLPVFESIDDVMARDHRDRINVEQHCLAREIVNLIACEGEDRVERHETLETWRSRFRMAGFGPYPLNSFINFTIKNLLEDYSKNYTLLEKDGALYLGWMNHPLVSSCAWR 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01932 485 Pfam GRAS domain family 122 485 IPR005202 -
Accr3g01932 485 ProSiteProfiles GRAS family profile. 112 485 IPR005202 -
Accr3g01932 485 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 83 479 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01932 Accr-Chr3 27923465 27924922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01932 1 485 GRAS Transcription Factor Family AT1G50600 52.206 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr3g01932 GRAS 1e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01932 - - pcin:129303763 824.313