Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01930 ATGAATCACTCGGACATTGAAAATATTGATGAAACTAGTATAAATTGGGAACAAGCTGTGAGTCAGTATGAAATGGTGATGTGTTCCGGGACTAAGACTATGCAAATAGAAGCCTTGATGAAGCTAGCCCGTCTCTCTAAACATGCCCCTGAGAGTTTACTAGTTCGCATTATACCTAATCTCATTGAGAATCTCGATGATTACCATTCAATTCATTCAAATTGTTCTCTTCAAAAGGCTTCTGCTTATTGCTTAAAATGTATAGCTTGTAGAGGTGATGGTGGGTTGGCAAAGGAAATAGGTAGACGTGGTGCAGCAAATTCTTTGTTATGGTGGCTGTCACGTTCTAATGGTCAGTTTCAAGAAGTCCTGATAAAATGTTTGCTTGTTGTTGTTACCTTTTGTGATTCAAGTCGTGCAGTTGTTGCTAGTAATGGTGGCGTAGAAGTTATAATCAGGTTGTTAGATTCTTGTACAAGTGATATTAGGCTATACCTGTTGGAAATTTTGAGTACATTGTCATTGCTGAGGGATGTTCGGAGGGCCCTCACTAGATTAGGAAGTCTTAAATTTCTTGTGGAGGCTGCTAGCTGTGGTAGCATGGTTTCTAGGGAAAGAGCTTGTCAAGCAATTGGGTTACTTGGCGTCCCAAGACGAGCCAGGCGTACACTAGTTGAACTAGGAGTGATTCCAGTACTTGTTGAGTGTCTTCATGATGGAGATCACACCATGAAACTTGTGGCTGGTAATGCCCTTGGTGTGATCTTTGCTCATATTGATTATATTAGATTAGTTGCTCAATCTGGGGTTATCTGTCTCTACGCTGAGCTTCTTCAAGGACATGACCCTTCTGGTAAGGAGATTGCTGAGGATGTATTTTGTATATGGGCTGTTGCTGAGGAGAATGCTGTTGAAATCACCAGACATTTGGTGAGAATTCTTAGAGAAGGGGATGATGAATCAAAGGCATCTGCTGCCGATGTGTTATGGGATCTGGCAAGTTACAAGCATGCAACATCCATGATCCGGGAATCAGGTGTGATTCCAATTCTGGTTGAGCTTCTGCAGAGTGGAAATGAAGAGATAAAGCAGAATGTTTCTGGAGCGTGTGGTCAACTGAGTTATGATGAGGCAGATAGAATGGCACTTGCTGAAGTGGGGGCAATCCCAATTCTCATCGAAATGATGCTGCATGATGAGTTGGAGGAAGTAAGGGATAATGCAGCCGAGGCTCTTGTCAACTTTGCTGAAGATCCTTTGTACCATGATAGAGTATCTGATGCAATAAGTGCTCCTTCATTTAGAGATATGCAGAACAGATTACTTCACATTCGTGCTTCAAATGAGCATATGGCTAGATCGTTACGTAGGATGACTGATTGGCAGCTCACATGGAACCCTGACCTTACTTAG 1413 0.4225 MNHSDIENIDETSINWEQAVSQYEMVMCSGTKTMQIEALMKLARLSKHAPESLLVRIIPNLIENLDDYHSIHSNCSLQKASAYCLKCIACRGDGGLAKEIGRRGAANSLLWWLSRSNGQFQEVLIKCLLVVVTFCDSSRAVVASNGGVEVIIRLLDSCTSDIRLYLLEILSTLSLLRDVRRALTRLGSLKFLVEAASCGSMVSRERACQAIGLLGVPRRARRTLVELGVIPVLVECLHDGDHTMKLVAGNALGVIFAHIDYIRLVAQSGVICLYAELLQGHDPSGKEIAEDVFCIWAVAEENAVEITRHLVRILREGDDESKASAADVLWDLASYKHATSMIRESGVIPILVELLQSGNEEIKQNVSGACGQLSYDEADRMALAEVGAIPILIEMMLHDELEEVRDNAAEALVNFAEDPLYHDRVSDAISAPSFRDMQNRLLHIRASNEHMARSLRRMTDWQLTWNPDLT 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01930 470 SUPERFAMILY ARM repeat 309 424 IPR016024 -
Accr3g01930 470 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 4 ARMC4 310 427 - -
Accr3g01930 470 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 346 388 IPR000225 GO:0005515
Accr3g01930 470 Gene3D - 11 306 IPR011989 -
Accr3g01930 470 Gene3D - 308 434 IPR011989 -
Accr3g01930 470 SMART arm_5 335 375 IPR000225 GO:0005515
Accr3g01930 470 SMART arm_5 217 257 IPR000225 GO:0005515
Accr3g01930 470 SMART arm_5 291 334 IPR000225 GO:0005515
Accr3g01930 470 SMART arm_5 376 417 IPR000225 GO:0005515
Accr3g01930 470 SMART arm_5 135 175 IPR000225 GO:0005515
Accr3g01930 470 SUPERFAMILY ARM repeat 4 334 IPR016024 -
Accr3g01930 470 Pfam HEAT repeats 308 412 - -
Accr3g01930 470 Coils Coil 398 418 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01930 297 431 U-box Gene Family AT3G46510 26.667 3.35e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01930 - - gmx:100819735 607.446