Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01925 ATGCATGACTCTCAAGTGAGCCACCATAATCTTCATCAAATGGAGCTTCTTGATTCCTTAAAGTTGGAAATGCCCCCAGAAACCAGCTTTTTCCTCCAACCCATTTTCACTCATGGGCTTTCTTGTTCTCTGCACGTGTCGTTACTACTTGCGTTACTGATAACATGGGCATGTCAGAAAGCCAAGGTAGGCCAAAGAGAAAGTGGAAGAACAAGACTTTACAAAACTGGTGTTTTGTACCACAGACGGACTCTTTTCTGTTGTCTAATTGTGTGTGCTTTTAACTTTGTGTTGTCCTTACTGATCTACTTTTACTGGTACAAGAAGGATAGCTCTGATCAGATTGTTATTACCGTGGATTTTGTGATGAAAACTGTTTCCTGGGGTGTTCTTTGTGTCTATTTGCATTCTAGACGATCCAGTTCAGGGGAACTTGACTTTCCAAGATTCTTGAGAATTTGGTTCTGGGCTTACTTCTTTGTTTTCTGTTCTTTCCTAGTAATAGACTTTCTGCTCTATAGAAAACATGTTTTGCTCCCAATAATATACCTGGTTTCTGATATCGGTTCCGCTTTCTTGGGTTTGTTTCTCTGTTACGTGGGATTTTCAGCGAGCAAAGAGGCAAAAAGTGCCCTTCTTGAAGAACCCCTTTTGAGTAGTGATTCTAGGGAAAGTAGCAGTTATGAGTCCTATAAGAACACCCCCTATTCAAAAGCTGGTTTTTTCAGTATTGTTACTTTCTCATGGATGAGTCCTCTAATTGCTGTTGGAAATAAGAAGACTTTAGACCTTGAGGACCTTCCTTTGCTCTCTAACCATGACAGTGTATATGGGACATTTCCAACATTTAGAAACAACCTTGAATCAGTGCGTACTGATGATCTTAGCAGAGTGACCACTCTTAAACTGGTGAAGGCTTTAATCTACTCAACATGGAAAGGGATTGTTTTGTCAGCTGTATTTGCATTCTTTTACACATGTGCTTCTTATGTTGGTCCCTTTCTGATTGACATCTTTGTTGAATATCTAAATGGACAAGAAAGCTTTAAATATGAGGGTTACGTTTTGGCAATGGCATTTTTTGGTGGAAAGCTTGTGGAATGCCTTGCACAGAGGCACTGGATGTTTAGGTTCCAGCAAGTTGGGATTAGGTTCCAATCAATGTTGGTGGCGATGATCTACGCAAAAGGATTGACCCTTTCGTGTCAATCAAAAGAAGGTAGAACTAGTGGGGAAATTATCAACTTAATGACTGTTGATGCTGCTAGGATTGGTGAGTTTTGTTGGTACATGCATGATCCATGGATGGCTGTTCTGCAAGTAACTTTAGCTTTAGTTATTCTATATAGAAGTGTTGGGATTGCTTCATTATCTGCTTTTGCTGCTACTGTTTTAATGATGTTGGCAAACTTGCCATTGGGGTCGCTTCAAGAGAAGTTCCAGAGAAAGTTAATGGAGTCAAAAGACACAAGAATGAAGGTAACCTCTGAGATTCTAAAGAACATGAGGATTCTGAAGCTTCAAGCATGGGAGATGAAGTTTCTGTCAAGAGTTATTGAGATTAGGAGCACTGAGACAAAATGGCTAAAGAAATTTTTATTCAGTTCAGGAATGACAAGATTCATCTTCTCTTCTGCCCCAACTTTCATTGCTATGGTTACTTTTGGTACTTGTATTCTCAAAGGAATCCCACTTGACTCTGGTAAGATCTTAGCTGCACTGGCCACTTTCAGAATTCTGCAGCAGCCTATATATAGCCTTCCTGACACAATTTCAATGATAGCACAAGCCAAAGTTTCCCTCGATCGGATCGCATCATTCCTTTGTCTCGAGGAATTACAGTCTGATGTCATAGAGAGGCTTCCTCGGGGTAGTTCGGCTACGGCAATTGAGATAGTAGATGGGAATTTCTCTTGGGATATATCTTCACCTGTTCCTACATTGCAAAATATAAACATCAACATAGTTCATGGCTTTAGAGTTGCAATTTGTGGTACTGTTGGTTCAGGAAAGTCAAGTTTACTCTCTTGTATACTTGGAGAAGTATCAAAACTCTCTGGGATAGTGAAGGTGTGTGGTACAAAGGCTTATGTTGCTCAGTCACCTTGGATACAAGGTGGAAAGATAGAAGAGAACATACTATTTGGGAAAGAGATGGATAGGGAAAAGTATGAGAAGGTTCTAGAAGCATGTTCCTTGAAAAGAGACCTAGAAATTCTTCCCTTTGGTGATCAAACTGTTATTGGAGAGAGAGGTATCAATTTGAGTGGTGGACAGAAGCAAAGGGTACAAATAGCTCGCGCTCTATACCAAGATGCTGATATATATCTTCTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCCCACCTCTTTAAGGAGTGTTTGCTTGGTCTTTTGAGTTCAAAAACAGTGTTATATGTGACTCATCAAGTAGAGTTCTTGCCCGATGCTGATCTAATATTGGTCATGAGAGATGGAAAGATAACTCAATCAGGGAAGTACAACGACATACTCAACTCAGGCACGGATTTTATGGAGCTTGTAGGAGCACACAAAGAAGCCTTATCTTCAATCAAAAAGTTAGAGAGAAAACCCACCTTTAAAGAAACTTGTACCACTGTGAATGAGACAGACTCATTAACTGAATTTGAACTTGAAGAAAATGTTGAAAACAAAGATGTTCAAGAAGAAGATGATAAAGGTGAAACGAAAGGCCAGCTTGTTCAAGAAGAAGAAAGAGAAAAGGGCAAAGTTGGGTTTGAAGTTTATTGGAAATACATCACAACAGCTTATGGAGGAGCTCTTGTACCTTTCATATTACTCTTGTATGTTCTTTTTCAGGTTTTTCAAATTGGAAGCAATTATTGGATGGCTTGGGCAGCTCCTGCATCAGCAACTTCTGAGCCTCCTGTTGGGAGCTTTACACTTTTGCTTGTCTTCGTTGTTTTGGCCATTTCCAGTTCTTTCTGCAACATTGCTAGAACCATGCTTGTTTTTGTAGCTGGATATAAGACAGCCACTACACTCTTCAAAAAATTGCATATGTGCTTCTTCCGAGCCCCTATGTCATTTTTCGATTCTACTCCAAGTGGACGAATCTTAAACAGAGCTTCCACAGATCAAAGCGCAGTAGATATGAGCATTCCACTTTTAGTAGCGGGAGTTGCCTTCTTTCTTATTCAGCTCATCGCAAATATTGCTGTGATGTCTCAAATTGCATGGCAGGTCTTTTTAGTATTTATTCCAGTGGTTGCAGCTTGTATATGGTATCAGCGATACTACTCAGAATCAGCACGAGAATTATCCCGTTTGGTTGGTACGTGTGAAGCTCCAGTTATACAGCATTTTTCTGAAACCATTTCTGGATCAATGACCATCAGAAGTTTTGACCAAGAAGAAAGGTTTCATGACACAAACATGAAACTGATAGACAGATATTCCAAGCCCAAGTTATACACTACCACTGCAATGGAATGGCTATGCTTCCGATTGGATATGTTATCTTCCATCACATTTGCTTTCAGTTTGATTTTCTTGATTTCTTTTCCAAATGCAATTAGTGTTCCTGGCATTGCCGGCTTGGCTGTGACATATGGTTTTAATCTAAACATGCTACAAGCTGCACTAGTTTGGGTGCTTTGCAATATGGAGAACAAAATTATATCAGTAGAAAGAATATTTCAGTATACTAACATCCCAAGTGAGCCTCCTCTTGTAATAGAAGAAAACAGACCAGATTGCTCATGGCCATCATCTGGGGAGGTTCATATCCAGGATTTACAGGTCCGATACGCTCCTCACTTGCCTCTTGTGTTGAGAGGTCTTACATGCACATTCAATGCTGGAGGAAAAACTGGCATTGTAGGGAGAACTGGAAGTGGAAAATCAACTCTGGTACAAACACTATTCAGGCTCATTGAACCAACATCTGGTCAGATACTAATAGACAGCGTCGGTATCTCTTCAATCGGTCTTCACGATTTAAGGTCTAGACTTAGCATTATTCCTCAGGATCCAACTATGTTTCAAGGGACTGTACGAAGTAATCTAGACCCACTTGAAGAGTACACTGATGAACAGATTTGGGAGGCTCTAGATATGTGCCAACTTGGAGATGAAGTCAGGAAGAAAGAAGGAAAGCTTGATTCCATTGTTACTGAGAATGGAGAAAATTGGAGTATGGGCCAGAGGCAACTGGTCTGCCTCGGCCGAGTTCTACTTAAGAAAAGCAAAATTTTGGTGCTTGATGAAGCTACTGCATCAGTTGATACTGCAACAGATAACATTATTCAACAAACCCTAAAGCAGCATTTCTCAGAATGTACAGTTATAACCATTGCGCACAGAATAACTTCTATCCTTGATAGTGACATGGTTTTGGTTCTGAGCCAAGGGCTTATTGAGGAATATGACTCCCCAAAAAGATTGCTGGAGAAGAAATCTTCATCTCTTGCTCAACTAGTTGCAGAATACACTCGCAGGTCCAACTCAGGTTTTGAAACTTAG 4515 0.4024 MHDSQVSHHNLHQMELLDSLKLEMPPETSFFLQPIFTHGLSCSLHVSLLLALLITWACQKAKVGQRESGRTRLYKTGVLYHRRTLFCCLIVCAFNFVLSLLIYFYWYKKDSSDQIVITVDFVMKTVSWGVLCVYLHSRRSSSGELDFPRFLRIWFWAYFFVFCSFLVIDFLLYRKHVLLPIIYLVSDIGSAFLGLFLCYVGFSASKEAKSALLEEPLLSSDSRESSSYESYKNTPYSKAGFFSIVTFSWMSPLIAVGNKKTLDLEDLPLLSNHDSVYGTFPTFRNNLESVRTDDLSRVTTLKLVKALIYSTWKGIVLSAVFAFFYTCASYVGPFLIDIFVEYLNGQESFKYEGYVLAMAFFGGKLVECLAQRHWMFRFQQVGIRFQSMLVAMIYAKGLTLSCQSKEGRTSGEIINLMTVDAARIGEFCWYMHDPWMAVLQVTLALVILYRSVGIASLSAFAATVLMMLANLPLGSLQEKFQRKLMESKDTRMKVTSEILKNMRILKLQAWEMKFLSRVIEIRSTETKWLKKFLFSSGMTRFIFSSAPTFIAMVTFGTCILKGIPLDSGKILAALATFRILQQPIYSLPDTISMIAQAKVSLDRIASFLCLEELQSDVIERLPRGSSATAIEIVDGNFSWDISSPVPTLQNININIVHGFRVAICGTVGSGKSSLLSCILGEVSKLSGIVKVCGTKAYVAQSPWIQGGKIEENILFGKEMDREKYEKVLEACSLKRDLEILPFGDQTVIGERGINLSGGQKQRVQIARALYQDADIYLLDDPFSAVDAHTGSHLFKECLLGLLSSKTVLYVTHQVEFLPDADLILVMRDGKITQSGKYNDILNSGTDFMELVGAHKEALSSIKKLERKPTFKETCTTVNETDSLTEFELEENVENKDVQEEDDKGETKGQLVQEEEREKGKVGFEVYWKYITTAYGGALVPFILLLYVLFQVFQIGSNYWMAWAAPASATSEPPVGSFTLLLVFVVLAISSSFCNIARTMLVFVAGYKTATTLFKKLHMCFFRAPMSFFDSTPSGRILNRASTDQSAVDMSIPLLVAGVAFFLIQLIANIAVMSQIAWQVFLVFIPVVAACIWYQRYYSESARELSRLVGTCEAPVIQHFSETISGSMTIRSFDQEERFHDTNMKLIDRYSKPKLYTTTAMEWLCFRLDMLSSITFAFSLIFLISFPNAISVPGIAGLAVTYGFNLNMLQAALVWVLCNMENKIISVERIFQYTNIPSEPPLVIEENRPDCSWPSSGEVHIQDLQVRYAPHLPLVLRGLTCTFNAGGKTGIVGRTGSGKSTLVQTLFRLIEPTSGQILIDSVGISSIGLHDLRSRLSIIPQDPTMFQGTVRSNLDPLEEYTDEQIWEALDMCQLGDEVRKKEGKLDSIVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQTLKQHFSECTVITIAHRITSILDSDMVLVLSQGLIEEYDSPKRLLEKKSSSLAQLVAEYTRRSNSGFET 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01925 1504 Pfam ABC transporter transmembrane region 944 1183 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr3g01925 1504 Pfam ABC transporter transmembrane region 316 583 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr3g01925 1504 Pfam ABC transporter 648 782 IPR003439 GO:0005524
Accr3g01925 1504 MobiDBLite consensus disorder prediction 897 913 - -
Accr3g01925 1504 FunFam ABC transporter C family member 5 615 862 - -
Accr3g01925 1504 FunFam ABC transporter C family member 3 1241 1493 - -
Accr3g01925 1504 CDD ABC_6TM_ABCC_D2 939 1233 IPR044726 GO:0140359
Accr3g01925 1504 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 630 853 IPR003439 GO:0005524
Accr3g01925 1504 MobiDBLite consensus disorder prediction 889 913 - -
Accr3g01925 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 629 852 IPR027417 -
Accr3g01925 1504 FunFam ABC transporter C family member 5 902 1239 - -
Accr3g01925 1504 Gene3D - 1241 1494 IPR027417 -
Accr3g01925 1504 CDD ABCC_MRP_domain1 630 830 - -
Accr3g01925 1504 CDD ABC_6TM_ABCC_D1 317 604 IPR044746 GO:0140359
Accr3g01925 1504 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 941 1221 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr3g01925 1504 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 236 1492 - -
Accr3g01925 1504 SUPERFAMILY ABC transporter transmembrane region 307 611 IPR036640 GO:0005524|GO:0016020
Accr3g01925 1504 FunFam ABC transporter C family member 10 299 612 - -
Accr3g01925 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1250 1484 IPR027417 -
Accr3g01925 1504 Gene3D - 613 878 IPR027417 -
Accr3g01925 1504 ProSitePatterns ABC transporters family signature. 755 769 IPR017871 GO:0005524|GO:0016887
Accr3g01925 1504 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1258 1492 IPR003439 GO:0005524
Accr3g01925 1504 Pfam ABC transporter 1275 1423 IPR003439 GO:0005524
Accr3g01925 1504 Gene3D ABC transporter type 1, transmembrane domain 291 612 IPR036640 GO:0005524|GO:0016020
Accr3g01925 1504 Gene3D ABC transporter type 1, transmembrane domain 901 1239 IPR036640 GO:0005524|GO:0016020
Accr3g01925 1504 SMART AAA_5 1284 1469 IPR003593 GO:0016887
Accr3g01925 1504 SMART AAA_5 657 830 IPR003593 GO:0016887
Accr3g01925 1504 SUPERFAMILY ABC transporter transmembrane region 939 1240 IPR036640 GO:0005524|GO:0016020
Accr3g01925 1504 CDD ABCC_MRP_domain2 1256 1476 - -
Accr3g01925 1504 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 316 596 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01925 Accr-Chr3 27585863 27592804 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01925 630 869 Calmodulin-binding Proteins AT2G36910 30.000 9.93e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01925 - K05666 gmx:106794105 2107.8