Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01917 ATGGCAAGCTCGATCCGAGTCATCTCTAAGAGTACTATACAATCAGCGGCTCGAAACAGCGATTCACCTCTAAAGATAGAGTTAAGTCCATGGGATCTTGAAGCCCTCCTATTGGATTTCCTCCAAGTAGGTTTTCTTTACCCCAACCCCAAAGAAAACAAAGACACAGTGATCCAAAACCTGAAAGCCTCTCTTTCTTCCACTCTAGATTTCTTCCCACAACTAGCAGGCCGTCTCACTGTCGTTGAACACGACGACGACACCTCCTCCGTTTTCATTAACTGCAACAACTCCGGAGCACTATTTATCCATGCTGTAGCAGAAGGCTTGACGATCTCAGACATCCTTCTACCCGTATACCTTCCTCCCATTGTCAGGTCCTTTTTTCCGCTTACCGAAGCTAAAAGCTACCAAGGCACGCACAAGCCACTGCTAGCCGTGCAAATCACGGAGCTCGTAGATGGCATCTTCATTGGGTGCTCCTTCAACCATACCGTTTCGGACGGCAGGTCGATGTTTCATTTCCTGACTTCCTGGTCTCAAATCTCACGCGGTGTGGGTATGTTATCCAAGCCACCCACGCTCGAACGTTGGTTTCTCGACGGTACTGATCGCCCTATACGCATTCGTTTTCCAAAGGAGAAGGTCAATCATTCACGGCTGCTTCTGGAAGAGAGGGTGTTTCATTTCTCAAAGGAAAAAATAGCGGAACTGAAAGCAAAAGCTAACGCAATGGTATCTTCGAATTATAAAATTTCTTCTCTGCAAGCACTTATGGCACATCTTTGGAGGTCTATAATTCGGAACCAAGATATGGACCCCAAAGAAGAGGTCGAGTTCGTGATGGTGATAGATTTCAGGCCGAGGATGAATCCGCCGTTGCCTCTTAATTATTTTGGAAACGCACTGGAAGATGGTATGGTGACCATGAAAGCTGGGGAACTGCTAAACCAAGAGGGGCTTGGTAAGGCTGCTTTGGAGATGAACAAGGCGGTTGCTTCATATACACATGAGAAGATAATAAGGCACATGAAGTCTTGGTTGGAAGACCCTAAGCTACTTACAGTCAGTGATATGTTTGCGGATGTAGTGGATATGGGTGGGTCGCCGACGTTTAATGGGTATAAGATTGACTTCGGATGGGGAAAACCAGTGGCGATCCGGAGTGGCCCCGGGGACAAATCGCATGGGACTATCATTGTGTTTGCAGGACCAGAGGAAGGTGACATTTATGCGGAAGTTCACCTTCCTTACAAGACATTGGAGGCCATGGCAAAAGATCATGAGTTTATGGATGCTGTCACGCCTGCGGTGGGATTTTTTACTGCAGCTGCTGTTAAAAAAATGACAACTCCTGTTAGATCAAGTTTGTAA 1374 0.4672 MASSIRVISKSTIQSAARNSDSPLKIELSPWDLEALLLDFLQVGFLYPNPKENKDTVIQNLKASLSSTLDFFPQLAGRLTVVEHDDDTSSVFINCNNSGALFIHAVAEGLTISDILLPVYLPPIVRSFFPLTEAKSYQGTHKPLLAVQITELVDGIFIGCSFNHTVSDGRSMFHFLTSWSQISRGVGMLSKPPTLERWFLDGTDRPIRIRFPKEKVNHSRLLLEERVFHFSKEKIAELKAKANAMVSSNYKISSLQALMAHLWRSIIRNQDMDPKEEVEFVMVIDFRPRMNPPLPLNYFGNALEDGMVTMKAGELLNQEGLGKAALEMNKAVASYTHEKIIRHMKSWLEDPKLLTVSDMFADVVDMGGSPTFNGYKIDFGWGKPVAIRSGPGDKSHGTIIVFAGPEEGDIYAEVHLPYKTLEAMAKDHEFMDAVTPAVGFFTAAAVKKMTTPVRSSL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01917 457 Gene3D - 1 216 IPR023213 -
Accr3g01917 457 Gene3D - 223 430 IPR023213 -
Accr3g01917 457 Pfam Transferase family 4 431 - -
Accr3g01917 457 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01917 Accr-Chr3 27328378 27330001 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01917 59 392 Monolignol Biosynthesis Gene Families AT5G48930 26.796 6.55e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01917 - - pvy:116114536 461.455