Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01898 ATGAGAAAGTGGAGTGGTGAGGACGAGGAGCGGTTTCAAATTGCTCTAATGTGCTATCCGGATGATTCTCCCAATCGATGGGAGAAGATCGCCGAGGTGGTTGGCTTCTCTAAGGAGATTGTTTACGAACGATATCGAATTCTCCAAATTGAATTGGGTCAAGTTTCACCATCGCAATGCACAAACTCTTCCACCAATAATCAACCCCACAAGAATAACAAGGGCTCCTCTTGGACTTTGGAAGAACATGCATTGTTCTTGCTGGGAGTGCAAAAATATGGCAAGGGACACTGGAAGAATATCTCTGAAAAGGCAGTAGGGACAAGGAACGCAACTCAAGTGGCAAGCCATGCTCAAAAGTTTTATATTCGCCAAAGAGAAAAGGAGACAATAGTGCATAGTAGAGGAAGCATCCATGATTTCACTTTGGCAAACTACCCACCAGCATATTTGAATGATCTTCTTTCTTCGCGTCTTCACTTGATGCCTGGCTCATTCATGATAATGCAACAACCCAACCTATCAATTCGTAGACATCTTCCACAACATGATGACCATCACTCACTGCCAATGACTCAATTGGGAACTGAAATTCCTTCAGTTCTTTATCAATCCCATCAAGATGCCTTACCAGCGCATTATGATCTTCAGCTGAGTCAGTTGTCTGCATCGATGAATCAAGTAGGCCCACAGAATCCTTCACCAGTTCATTTGCAAAACCCATGTCATCAACCTAACTCACAAGTTGTGAGTCCATTACTACCAATGAATCAAGCGGATTACTCCGAGTCACAATATCCGTATCATACTATTCTTCCACAGCAAAACTTACCACTGAATCATCAATTTACGCCACATAATTACCAGTGTTGA 873 0.4273 MRKWSGEDEERFQIALMCYPDDSPNRWEKIAEVVGFSKEIVYERYRILQIELGQVSPSQCTNSSTNNQPHKNNKGSSWTLEEHALFLLGVQKYGKGHWKNISEKAVGTRNATQVASHAQKFYIRQREKETIVHSRGSIHDFTLANYPPAYLNDLLSSRLHLMPGSFMIMQQPNLSIRRHLPQHDDHHSLPMTQLGTEIPSVLYQSHQDALPAHYDLQLSQLSASMNQVGPQNPSPVHLQNPCHQPNSQVVSPLLPMNQADYSESQYPYHTILPQQNLPLNHQFTPHNYQC 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01898 290 Gene3D - 76 127 - -
Accr3g01898 290 Pfam Myb-like DNA-binding domain 76 120 IPR001005 -
Accr3g01898 290 ProSiteProfiles SANT domain profile. 76 126 IPR017884 -
Accr3g01898 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 126 IPR017930 -
Accr3g01898 290 SUPERFAMILY Homeodomain-like 72 126 IPR009057 -
Accr3g01898 290 NCBIfam myb-like DNA-binding domain, SHAQKYF class 73 125 IPR006447 GO:0003677
Accr3g01898 290 SUPERFAMILY Homeodomain-like 3 48 IPR009057 -
Accr3g01898 290 Gene3D - 1 57 - -
Accr3g01898 290 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 2 244 IPR043363 -
Accr3g01898 290 SMART sant 1 51 IPR001005 -
Accr3g01898 290 SMART sant 74 124 IPR001005 -
Accr3g01898 290 ProSiteProfiles Myb-like domain profile. 70 122 IPR001005 -
Accr3g01898 290 CDD SANT 77 121 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01898 Accr-Chr3 26651261 26652251 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr3g01898 Myb_DNA-binding 2.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01898 - - csav:115697466 120.168