Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01888 ATGTTCTGTGAGATTCAGAGGCACAAGAAGAAGAAGAAGAAGAAGAAGGTGATGAAGATGGTGGGGTTGTCATTAGAATACAGAGTTTTAATTTTTTTTGCTTTGGTGATTTCGTTAGTGGTTGTTTTAGCAGCAGAAAGTGCTGATAATAATGGTGGGTCCGAGAGAGATTACATTACGTGGGATGATTTAACTGTGGATGAAAATGGCTTAGCCTCCTCAAAATCTAACAGTGATCTTCAAGTTATTCTGGTTGACCAGAATGGAAATGGACATTCTTCTACAGTTCAAGGAGCTGTAGATATGGTTCCAGATCATAACACACAGAGGGTCAAGATATACATTTTTCCAGGAACTTACAGAGAGAAGGTGTTTGTACCAAAGAACAAGCCATATGTGTCATTCATAGGGAAAAGAAATGAGACACATGGAGCGGTGATTACTTGGAACAGCAAGTCATCGGACATTGGGTCAAATGGCCAAGAATTGGGGACTTATGGTTCTGCAACTGTAGCTGTAGAATCTGATTATTTCTGTGCAAGTAGGATCGCTTTTGAGAACTCTGTAGTTGCAAAGGCTGGTGGACAAGGAATGCAAGGAGTAGCATTGAGGGTAGAGAGTAAAAGAGCAATGTTCTTTCAAGTTAAATTCTTGGGAACACAGGACACTCTCTTGGATGACACAGGAACTCATTACTTCCTCAAGTGTTTCATCCAAGGCAAAATTGACTTCATCTGTGGCAGTGCAAGATCACTTTATGAGGGTTGTCGTCTGAGATCAACGGCCGATAGCTATGGAGCGATTGCGGCTCATCACAGGGACACACCCAATGAAGACACAGGGTTTTCATTTGTGGACTGTTCAATCCAAGGAACTGGTCAGGTTTACCTTGGGAGAGCATGGGGAGACTATTCAAGAATCATATACTCAAACTGTTATATGGATGACATTATAATCCCACAAGGCTGGACTGAATGGAATCACCCTTCAAGAGAGAAGACTGCACTTTTTGGAGAGTTTCAGTGCAAAGGAAAAGGAGCAGAGACAAGTGATCGAGTTTCATGGTCAAAATCTCTCACTTATGACGAAGCAAAGCCTTTTCTGGACAGAAGCTTCATAAATGGAGACCAATGGCTTAGATTGTAG 1146 0.418 MFCEIQRHKKKKKKKKVMKMVGLSLEYRVLIFFALVISLVVVLAAESADNNGGSERDYITWDDLTVDENGLASSKSNSDLQVILVDQNGNGHSSTVQGAVDMVPDHNTQRVKIYIFPGTYREKVFVPKNKPYVSFIGKRNETHGAVITWNSKSSDIGSNGQELGTYGSATVAVESDYFCASRIAFENSVVAKAGGQGMQGVALRVESKRAMFFQVKFLGTQDTLLDDTGTHYFLKCFIQGKIDFICGSARSLYEGCRLRSTADSYGAIAAHHRDTPNEDTGFSFVDCSIQGTGQVYLGRAWGDYSRIIYSNCYMDDIIIPQGWTEWNHPSREKTALFGEFQCKGKGAETSDRVSWSKSLTYDEAKPFLDRSFINGDQWLRL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01888 381 FunFam Pectinesterase 78 381 - -
Accr3g01888 381 Gene3D - 79 381 IPR012334 -
Accr3g01888 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 73 380 - -
Accr3g01888 381 Pfam Pectinesterase 83 376 IPR000070 GO:0030599|GO:0042545
Accr3g01888 381 SUPERFAMILY Pectin lyase-like 82 379 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01888 Accr-Chr3 26473202 26475229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01888 29 333 Carbohydrate Esterase AT5G55590 54.630 1.43e-129 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01888 K01051 - gmx:100804220 486.493