Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01880 ATGGCCAGTAATGGTGCAAGCAAGCCCTTGTTGCCCCAATCACCAGATCCAGCTGCTCCAAAAACAAATGGCCAGGTTAGCAAGAGAAGGTATCTCCGTTGTAAAAGTGCTCCTCTTGCTAATGTTGATCTACCTGAGAAAACCAACATTGGCTCAAATCATCGTTCTGACTCCATATTTGGGAAGTTACATCCAAGTTTTCGAAATGTGGCTATGTATCTTATAGGGTATTTAGGTATTGGAGCTGTGATCTTCTATCTTGTCAGGCACCAGATCACAGGGAAGAAAACAGTGGGGGTCCTTGATGCTATATACTTTACAATTGTCACGATGACCACAGTTGGATATGGAGACCTTGTGCCAAATAGTGACCTTACAAAACTACTTGCCTGTGCTTTTGTCTTCACAGGAATGGCACTAGTTGGTTTAATCTTAAGCAAAGCAGCAGACTACTTGGTTGAGAAGCAGGAAACTTTGATAATCAAAGCTCTGCATATGAAACATAAAGTTGGTCCAACTCAAATTCTACAGGAGGCTGAGGTCAACAGGACGTTGTATAAATTTTTTGTGGCTTTTTTCCTGCTTTTGGCGCTCATTATTATGGGGACGCTTTTCTTAGTCACTGTTGAGAAATTGAAAGTTATTGATGCATTCTATTGTGTCTGTTGTACAATAACAGGCCTGGGTTATGGTGATAAAAGCTTCTCTAGTGAAGGAGGAAGAGTCTTTGCTGTGTTTTGGATATTGACTAGTACTATTTGCTTAGCTCAGCTTTTCCTTTACATTGCTGAGATGAACACTGGAAAAAGACAAAAGGAAATCACTAAGATGGTCCTTACGCGGAGGACAACTAATGCAGACTTGGAGGCAGCAGATATGGATCATGATGGAGCTGTTGGGGTTTCTGACTTCATTATCTATAAGCTCAAAGAGATGGGGAAGATAAGTCAAGAAGATATCGCACTCATAATGCAGCAGTTTGAGGAGCTTGATTTTGATCAATCTGGTACTCTTTCACCTTCTGATATAACTCTTGCTCAGGCACCTTCCCCGTCTTAG 1059 0.4145 MASNGASKPLLPQSPDPAAPKTNGQVSKRRYLRCKSAPLANVDLPEKTNIGSNHRSDSIFGKLHPSFRNVAMYLIGYLGIGAVIFYLVRHQITGKKTVGVLDAIYFTIVTMTTVGYGDLVPNSDLTKLLACAFVFTGMALVGLILSKAADYLVEKQETLIIKALHMKHKVGPTQILQEAEVNRTLYKFFVAFFLLLALIIMGTLFLVTVEKLKVIDAFYCVCCTITGLGYGDKSFSSEGGRVFAVFWILTSTICLAQLFLYIAEMNTGKRQKEITKMVLTRRTTNADLEAADMDHDGAVGVSDFIIYKLKEMGKISQEDIALIMQQFEELDFDQSGTLSPSDITLAQAPSPS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01880 352 MobiDBLite consensus disorder prediction 1 26 - -
Accr3g01880 352 FunFam Calcium-activated outward-rectifying potassium channel 1 64 159 - -
Accr3g01880 352 Pfam Ion channel 194 265 IPR013099 -
Accr3g01880 352 Pfam Ion channel 73 153 IPR013099 -
Accr3g01880 352 SUPERFAMILY Voltage-gated potassium channels 183 265 - -
Accr3g01880 352 ProSitePatterns EF-hand calcium-binding domain. 331 343 IPR018247 -
Accr3g01880 352 Gene3D - 67 166 - -
Accr3g01880 352 SUPERFAMILY EF-hand 280 344 IPR011992 -
Accr3g01880 352 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 71 321 IPR003280 GO:0005267|GO:0016020|GO:0071805
Accr3g01880 352 Gene3D - 172 278 - -
Accr3g01880 352 SUPERFAMILY Voltage-gated potassium channels 66 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01880 Accr-Chr3 26283961 26287677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01880 59 350 Ion Channels AT5G55630 63.356 1.09e-138 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01880 K05389 - qsu:112034742 463.381