Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01865 ATGTGTTCAAGAAGGACCCTAGTTCTGTTCTTTTTCTTCTTGTTCTTCTTCCTGAACCCAACAGTGTTGTCGCAAAACCTCACATTCGAATTTTCTTCCTTTACGACTCTCCGGAATATTACTCTCCTCGGCGATTCCTTTCTCCGGAACGGCGTCATCGGCCTCACCAGATCGTCCGACGTGCCCACTTCCAGCTCCGGAGCCGTAATCTACAACAATCCCATTTCTCTCCTCGACCAACAATCAAACACTTCATCTTCATTCTCAACATCATTCGCTTTCTCCATCACCGACAACCTGAACAATCCTCCTTCCCTTGTGGATGGTTCCTTATCATTCTTTCTATTTCCCAGCAACCACACCCTTGGGAGTATCGGCGGGTATGTGGATCCTCTCGATTCCTCCCAATTAACCCGATCCAACTTGGTTGCCGTCAAATTCAAGCCTAATGATAATCGAGTTGAGTTGGATCTAAACGGAATTGCTTCAATCAATGCCACCGGGGATACCATCTCACAGGGAATTGATCTTAAGAGTGGGAAATTGATCACAGCTTGGATTGATTACGAGAGTGAAAAGAGGAAGCTACGAGTGTTCCTGAGTTATAATAATTGGAGTTCAAACTTAAACACTGAGAACCCAATTCTGAAGGTTGATGATCTTGACTTTTCTGGGTATATCAAGGAGATAGTGTACGTGGGATTTGCTGCTTCCACTGAGGGGAGCACTGAGCTTCATCATATTGTGGACTGGAGATTCCAAAGTAATGGATCTCTTCCTGCAAAGTTTCGTACACATAACGCTTCTAATAGCTTTGTGAGTGCAACAGTGGACGTTCATAACAAGTCCCATAATAATTCCAGCAACAAGCATGATAAAAGGCTTGGATTAATTATAGCCATTGCTGGTCCAGCTTTAATCTGTGTATTCCTGGTATGTTTGGCCTATATTTCTTTACGGAAAAGGAGGAATAGCAGAACACTGAAGAGAGTGAAAAGTGAGTTGATGGCTTGTCCTAGAGAATTTAGTTACAAAGAATTGAAATTAGCCACAAAAGGGTTTCACTCAAGTAGGATCTTGGGCCAAGGATCGTTTGGAACAGTTTATAAAGCCTTGTTTCTACCTTCAGGAACCATTGCTGCTGTGAAAAGGTCAAAGCACTCTCATGATGGAAAAACAGAATTTCTAGCTGAACTATCCATCATAGCTGGTTTGAGACACAAGAATCTGGTTCAGCTCCAAGGTTGGTGCGTTGACAAGGGAGAATTGTTGCTTGTGTATGACTTCATGCCCAATGGAAGCTTAGATAAGATGCTCTACCAAGAATCTGAAGAGAACCAGAACTTGTTGAACTGGTCTCGTAGACTTAATATTGTTATTGGGTTGGCTTCTGTTCTGACTTACCTCCACCAAGAATGTGAAAAAAGAGTCATTCACAGAGACATTAAGACTGGAAACATATTGCTAGACGCGAATTACAACCCAAGGTTGGGGGATTTCGGACTGGCAAAGCTGATGGATCATGATAGAAGCCCAGTTTCAACATTAACAGCAGGAACAATGGGTTACCTTGCACCTGAGTATCTTCAATATGGCATGGCTACTGAGAAAACTGATGTTTTCAGCTATGGTGTGGTTATTCTTGAAGTGGCATGTGGGAGGAGACCAATTGAAAGAGAAGGCCAAAACATGGTCAATTTGGTTGATTGGGTTTGGGGGCTGCACTCTCAAGGGAAGATAATTGAAGCAGCTGATAACAGGTTGAACGGAGAATTTACAGAGAAAGAGATGAAGAAACTTTTGCTTTTGGGATTGAGCTGTGTAAACCCAGATAGTGCTGAAAGGCCTTCCTTGACTAGGGTTTTGCAGATTCTCAGCAACAACGATGAAGCAACTAGCACGCTTATTGTGCCAAAGGTGAAACCATTCCTCACTTTCTCTTGTGGCTTACCTTTGAGTCTTGATGACATTGTTTCAGATAGTGATGTGGAGTTCAGTACTGAGAAGTCCTTGCGTGAGATAAGAATTGACTAA 2034 0.4282 MCSRRTLVLFFFFLFFFLNPTVLSQNLTFEFSSFTTLRNITLLGDSFLRNGVIGLTRSSDVPTSSSGAVIYNNPISLLDQQSNTSSSFSTSFAFSITDNLNNPPSLVDGSLSFFLFPSNHTLGSIGGYVDPLDSSQLTRSNLVAVKFKPNDNRVELDLNGIASINATGDTISQGIDLKSGKLITAWIDYESEKRKLRVFLSYNNWSSNLNTENPILKVDDLDFSGYIKEIVYVGFAASTEGSTELHHIVDWRFQSNGSLPAKFRTHNASNSFVSATVDVHNKSHNNSSNKHDKRLGLIIAIAGPALICVFLVCLAYISLRKRRNSRTLKRVKSELMACPREFSYKELKLATKGFHSSRILGQGSFGTVYKALFLPSGTIAAVKRSKHSHDGKTEFLAELSIIAGLRHKNLVQLQGWCVDKGELLLVYDFMPNGSLDKMLYQESEENQNLLNWSRRLNIVIGLASVLTYLHQECEKRVIHRDIKTGNILLDANYNPRLGDFGLAKLMDHDRSPVSTLTAGTMGYLAPEYLQYGMATEKTDVFSYGVVILEVACGRRPIEREGQNMVNLVDWVWGLHSQGKIIEAADNRLNGEFTEKEMKKLLLLGLSCVNPDSAERPSLTRVLQILSNNDEATSTLIVPKVKPFLTFSCGLPLSLDDIVSDSDVEFSTEKSLREIRID 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01865 677 PANTHER - 41 628 - -
Accr3g01865 677 FunFam L-type lectin-domain containing receptor kinase VIII.1 318 429 - -
Accr3g01865 677 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 257 IPR013320 -
Accr3g01865 677 Gene3D - 24 257 - -
Accr3g01865 677 ProSiteProfiles Protein kinase domain profile. 354 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01865 677 FunFam L-type lectin-domain containing receptor kinase VIII.1 430 646 - -
Accr3g01865 677 Pfam Protein kinase domain 354 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01865 677 CDD STKc_IRAK 360 625 - -
Accr3g01865 677 SUPERFAMILY Protein kinase-like (PK-like) 338 643 IPR011009 -
Accr3g01865 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Accr3g01865 677 Gene3D Phosphorylase Kinase; domain 1 315 429 - -
Accr3g01865 677 Gene3D Transferase(Phosphotransferase) domain 1 430 639 - -
Accr3g01865 677 CDD lectin_legume_LecRK_Arcelin_ConA 27 257 IPR001220 GO:0030246
Accr3g01865 677 Pfam Legume lectin domain 27 260 IPR001220 GO:0030246
Accr3g01865 677 SMART serkin_6 354 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01865 677 ProSitePatterns Protein kinases ATP-binding region signature. 360 383 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01865 Accr-Chr3 25820465 25822498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01865 3 662 Receptor kinase-like Gene Family AT5G55830 56.509 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Accr3g01865 Pkinase 4.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01865 - - qsa:O6P43_021312 823.542