Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01853 ATGAAGCCTTACACAGCCATGGCCATCATCAATTTTCTTCTGTGCATAGTCTTACAAACCTCGTTCAAAGCTAGAGCTGCCATGGCCATAGGGTCAGAGACTGATAGACTCGCTTTACTAGTTCTGAAAGATAAGCTAACCAATGGTATTTCAGAAGCCCTTCCTTTTTGGAATGATTCTGCCCACTTCTGCAAATGGCAAGGCATTACATGTAGTCTCCGTCACATGAGAGTCTCAGCTTTGAACTTGTCAAATCAAAATTTGGGTGGCACTCTTGCTCCAGCATTAGGTAATTTAACTTTTCTTAGATCACTTGATCTTTCCTTTAATGGGTTGTTGCATGGAGAAATTCCCAAACAAATCGGTCGTCTTAAACGATTGCAGATTTTAGATTTGAGTAAAAATCATTTTGAAGGACAAGTTCCTATAGAGCTGGGTAATTGTTCTAAACTCCAGGAGATTTTCTTGACTTCTAATAATTTGACTGGTGAAATTCCCTTATGGTTTGGATCTATGCAACAACTTACGTCGTTGGGGCTTGGTACTAATAAATTTCATGGAAATATTCCACCTTCCTTGGGAAATATTTCATCCTTGGAGCGTTTATCTCTTTCATATAATAATTTGGAAGGAAGTATACCTCAATCTCTGGGTGGGCTGTCAAATTTGTACTTGCTCTATCTTGGTAACAACAGTCTCTCGGGTATAATCCCTTCTTCACTTTACAATCTTTCTCGCATGGAACTTTTAGGTTTTTCTTTCAACCACTTGTCTGGAACTATTCCAACAAACATTGGCCTTGCTTTCCCAATTCTTCGATCTTTTAATGTGGGAGGCAACATGCTGTCGGGAACTATTCCTTCTTCATTTTCCAACATCTCTCAATTGCAATTGTTCGCAATATCTGAAAATGATTTTAGTGGCCTGGTCCCTACCTCATTAGGAAGACTACAAAACCTTCAAAAATTTGTGATTCACACAAATAATTTTGGGAATGAAGGAGGCCATGACCTGGATTTCCTCTCATCCTTAACAAATTGTAGTCAATTGCTTGTAATAGAGATGCTGAATAATAAATTTAGTGGTGTATTGCCAAAGTCAATTGGGAATCTCTCTTCCCACCTTAATACACTTAGTATGGGATTCAATCGTATCTTTGGAAGCATACCATATGAGATTGGACAACTAGATGGCTTAATGTACCTTGGTTTGGAATCTAACTTCCTTCAAGGCGCAATCCCCCATTCGATTGGAAAGCTTGGAAATCTTGGAAGGCTACTCCTTGACCAAAATCAATTATCCGGTAGAATTCCTGATATATTTGAAAATCTCACTAAGTTGTTCGAACTTTCGATGTCTAAAAATAACTTGGAGGGAACCATTCCAGTGAGCCTCACGCATTGCAAAAGCTTGCAATTCTTGTACATAGATAAAAATTACTTGACTGATAATATACCAAATCAAACTTTTGTTCATCTAGGAAGCTTGATACACCTTGACATGTCTTCCAACTACTTGGTTGGTCCCATTCCATCTGAGATTGGCAACATGAAGCAATTAGTGCGATTAAATATAAACGCAAACAATTTTTCTGGTGATATTCCAATGGAACTTGGGAAATGCTTAGATTTGACAGATCTTTATATGCGTAAAAACTTCCTCCATGGAAGCATCCCCTCATCATTTGGTTCCTTAAAATCCCTCATCAACTTAGACCTTTCCAACAATAACTTGTCAGGCACAATTCCACAAGAACTAAAAGAACTTCCAATGTTGAAGACCCTGAACCTGTCTCACAACCATTTTTATGGTGAGGTTCCAAAAGGAGGAGTGTTTGATAACATCACAGCTATTTCAATCACAGAAAATGAGAAACTTTGTGGTGGAATACCTCAGCTAAAGCTACCTATGTGCCCAACTAAGTCGAAGAAGCATTTCAAAGTAATAATCCTCATCATTGTGATAAGCTGTGCTCTTCCTTGTTTTGCAATTTTCCTAATCACTTACAAGAGAAGAAAACATAAAAGGTTGCCTCCCTCCCCATCTTCCCCGCAAAATACTCATTTGAGGGTTTCTTATAAAGAGCTACATGATGCAACCAACGGATTCTCTTCATCCAATTTGGTTGGTATTGGAAGCTTTGGTTCTGTATACAAAGGAGTGCTTCAACACTTTGAAAAACCTATTGCTATAAAGGTGCTAAATCTTCAAACATATGGGGCAACAAAGAGTTTCATCACAGAATGCAAAACTCTTGGTAAAGTTCGGCATAGGAATCTATTGAATATTTTGACGTCATGTTCAAGTGTTGATTACAAAGGAAATGATTTTAAGGCCCTGGTTTTTGAGTTCATGCCAAACGGGAGCTTGGAGAATTGGTTGTCAACAAACAAACTTGGTGAGCATAGAGATTTATATATGACTTTTAAACAAAGACTGGATGCAGCTATTGATGTGGCTCATGCTTTGGATTATCTTCATCATGATTATGAGGAAGCTATTGTTCATTGTGACATCAAGCCAAGTAATGTTCTCCTTAGTGATGATATGGTCGCACAGTTGGGAGACTTTGGATTAGCTAGGCTTCTTCATGAGGGTCAAACTACATCCTCAGCTATTAAGGGAACTATTGGGTATATTCCTCCAGAGTATGGAGAAAGTGGCCAAGTCACGACACAAGGTGATATCTACAGCTATGGGGTTCTTATACTAGAGATGCTAACCGGAAAGAAGCCAACAGATAGCATATTTTGCGAGGATCTAAGCCTACCCAAGTTCTGTAAGTTGGCATTGCCAAACAAAGTCCTTGAGGTGGTGGATTCAAGCCTGTTGGTTCACATTGATAGAGACCAAATGGAGTTTATGCAAGAGTCTCTATTTAGTTTTGCTGGAATTGGAGTAGCATGTTGTGCAGAATTACCAAGGGAGCGAATGGGAATAAAAGATGTTTTGGTGGAGCTGCTCGCAATTAAACAGAGGTTATCTACATTTTAA 2994 0.3878 MKPYTAMAIINFLLCIVLQTSFKARAAMAIGSETDRLALLVLKDKLTNGISEALPFWNDSAHFCKWQGITCSLRHMRVSALNLSNQNLGGTLAPALGNLTFLRSLDLSFNGLLHGEIPKQIGRLKRLQILDLSKNHFEGQVPIELGNCSKLQEIFLTSNNLTGEIPLWFGSMQQLTSLGLGTNKFHGNIPPSLGNISSLERLSLSYNNLEGSIPQSLGGLSNLYLLYLGNNSLSGIIPSSLYNLSRMELLGFSFNHLSGTIPTNIGLAFPILRSFNVGGNMLSGTIPSSFSNISQLQLFAISENDFSGLVPTSLGRLQNLQKFVIHTNNFGNEGGHDLDFLSSLTNCSQLLVIEMLNNKFSGVLPKSIGNLSSHLNTLSMGFNRIFGSIPYEIGQLDGLMYLGLESNFLQGAIPHSIGKLGNLGRLLLDQNQLSGRIPDIFENLTKLFELSMSKNNLEGTIPVSLTHCKSLQFLYIDKNYLTDNIPNQTFVHLGSLIHLDMSSNYLVGPIPSEIGNMKQLVRLNINANNFSGDIPMELGKCLDLTDLYMRKNFLHGSIPSSFGSLKSLINLDLSNNNLSGTIPQELKELPMLKTLNLSHNHFYGEVPKGGVFDNITAISITENEKLCGGIPQLKLPMCPTKSKKHFKVIILIIVISCALPCFAIFLITYKRRKHKRLPPSPSSPQNTHLRVSYKELHDATNGFSSSNLVGIGSFGSVYKGVLQHFEKPIAIKVLNLQTYGATKSFITECKTLGKVRHRNLLNILTSCSSVDYKGNDFKALVFEFMPNGSLENWLSTNKLGEHRDLYMTFKQRLDAAIDVAHALDYLHHDYEEAIVHCDIKPSNVLLSDDMVAQLGDFGLARLLHEGQTTSSAIKGTIGYIPPEYGESGQVTTQGDIYSYGVLILEMLTGKKPTDSIFCEDLSLPKFCKLALPNKVLEVVDSSLLVHIDRDQMEFMQESLFSFAGIGVACCAELPRERMGIKDVLVELLAIKQRLSTF 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01853 997 Gene3D Ribonuclease Inhibitor 32 187 IPR032675 -
Accr3g01853 997 SUPERFAMILY Protein kinase-like (PK-like) 682 987 IPR011009 -
Accr3g01853 997 Gene3D Phosphorylase Kinase; domain 1 684 784 - -
Accr3g01853 997 SMART LRR_typ_2 493 517 IPR003591 -
Accr3g01853 997 SMART LRR_typ_2 589 614 IPR003591 -
Accr3g01853 997 SMART LRR_typ_2 220 243 IPR003591 -
Accr3g01853 997 SMART LRR_typ_2 420 443 IPR003591 -
Accr3g01853 997 SMART LRR_typ_2 99 124 IPR003591 -
Accr3g01853 997 SMART LRR_typ_2 565 588 IPR003591 -
Accr3g01853 997 SMART LRR_typ_2 196 219 IPR003591 -
Accr3g01853 997 SMART LRR_typ_2 444 468 IPR003591 -
Accr3g01853 997 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Accr3g01853 997 SUPERFAMILY L domain-like 373 628 - -
Accr3g01853 997 SMART serkin_6 703 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01853 997 Gene3D Ribonuclease Inhibitor 188 339 IPR032675 -
Accr3g01853 997 Pfam Protein kinase domain 705 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01853 997 PRINTS Leucine-rich repeat signature 568 581 - -
Accr3g01853 997 PRINTS Leucine-rich repeat signature 589 602 - -
Accr3g01853 997 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 342 988 - -
Accr3g01853 997 Pfam Leucine rich repeat 544 602 IPR001611 GO:0005515
Accr3g01853 997 Pfam Leucine rich repeat 422 481 IPR001611 GO:0005515
Accr3g01853 997 Pfam Leucine rich repeat 198 257 IPR001611 GO:0005515
Accr3g01853 997 Gene3D Ribonuclease Inhibitor 340 640 IPR032675 -
Accr3g01853 997 ProSiteProfiles Protein kinase domain profile. 703 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01853 997 ProSitePatterns Protein kinases ATP-binding region signature. 709 732 IPR017441 GO:0005524
Accr3g01853 997 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 71 336 - -
Accr3g01853 997 FunFam LRR receptor-like serine/threonine-protein kinase EFR 337 644 - -
Accr3g01853 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Accr3g01853 997 FunFam LRR receptor-like serine/threonine-protein kinase EFR 674 784 - -
Accr3g01853 997 Gene3D Transferase(Phosphotransferase) domain 1 785 996 - -
Accr3g01853 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 785 997 - -
Accr3g01853 997 SUPERFAMILY L domain-like 32 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01853 Accr-Chr3 25579636 25582769 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01853 33 993 Receptor kinase-like Gene Family AT3G47570 44.456 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Accr3g01853 Pkinase 2.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01853 - - ahf:112766919 1026.54