Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01848 ATGATCCGCTTCATTATTACCGCCAATTTTCTCTTATGCATAGCTTCTCAAATTCTGTTGCAAACTGGAGCGGCCATGTCCAGTGGTTCAGAGATTGATAGGCTTGCTTTGCTTGCTTTGAAGGACAAGTTAACCAATGGTGTTCCAGAAGCCCTATCTTCATGGAATGATTCAGTCCACTTCTGCAAGTGGCAAGGTGTTACATGCAATCTCCGTCACAAGAGAGTCTCAGCTTTGACGTTGACAAATCAAAATTTTGGGGGCACTCTTGCGCCATCATTAGGTAACTTAACCTTTCTCAAAACGCTCAATCTTTCCTCTAATGGATTGCATGGTCAAATTCCCAAACAAATTGGCCATCTTAGACGATTGATGTCACTCGATTTGCAAACAAATTATCTTGAGGGAGAAGTCCCTTTAGAGTTGGCTAACTGTTCCAAACTCCAGATGATTTTATTCACTTACAATAATTTGACTGGCAAAATTCCCTTATGGTTTGGATCTATGCAACAACTTACAGGGTTGGGACTTGGTATTAATCAATTTCATGGAAATATTCCAACTTCCTTTGGAAATCTTTCATTCTTGGAGAAATTGTCTCTTGCATATAATAGATTGGAAGGAAGTATACCACAATCTCTAGGTGGGCTATCAAATTTGTACTTGCTCTTTCTTGGTAGCAACAATCTTTCTGGTTTAATCCCTTCATCAGTTTACAATCTTTCTCGCATGGAAAGTTTGAATTTCCCTTTCAACTATTTGTTTGGAACTCTTCCATCAAATATCGACCATGCTTTCCCAAATCTTAAATCTTTTAATGTGGGACACAACATGTTGACGGGAACTATTCCACCTTCATTATCCAACATTTCTCAGTTGCAAAATATTGAAATATATGAAAATGCTTTTACGGGCTTAGTCCCCATCTCAGTGGGAAGATTGCAAAACCTTGATAGATTTGTAATTTCAAAAAATAATTTTGGGAGTAAAAAAGGTCAAGACCTAGATTTCCTCTCATCAATAACAAATTGTAGTCAACTGCAGTTAATAGATATTTCTTATAACAAATTTAGTGGTGTATTGCCAAATTCAATTGGGAATCTTTCTTCCCAGCTTCAAGTAGTTAGTATGGCAGTCAATCATATCTTTGGAAGCATACCTAATGAAATTGGGCAACTGGGTAGCTTATATCACCTCAGTTTGGCATCTAACTTCCTTCAAGGCACAATTCCACATTCAGTTGGAAAGCTTGAAAATCTTGGAAAGCTCTCCCTACGGCAAAATCAATTATATGGTAGAATTCCTGATATCTTTGGAAATCTTACTAAGTTGATTGATCTTCCGTTGAATGATAACAATTTTGAGGGAACTACTCCAGTAAGCCTCAAACATTGCAAAGGTATGCAATTCTTGCGTATAAATCAAAATAACTTGAGCGGCAATATACCAAATCTAACTTTTGGTCAGCTAGAAAGTTTAATATATCTTGACATGCATTCCAACTCTTTAATTGGTTCCCTTCCATCTGCGATTGGTAACATGAAGCATTTAGTGAAATTAGATTTGAGTGAAAACAAATTTTCTGGTGATATTCCAATGGAATTCGGGGAATGCTTACAGTTGACAGATCTTTCTATGAGTCAAAACTTCCTCCAAGGAAGTATCCCCTCATCCATTAGTTCCTTAAAATCTCTGATCAACTTAGACCTTTCCTACAATAACTTGTCTGGCACAATCCCACAAGAACTAAAAGATCTTCCTATATTGGAGAATTTGAACCTATCTCACAACCATTTTTATGGTGAGGTTCCAAAAGGGGGAGTGTTTGATAATATCACCGCAATTTCACTCACAGGAAATGAGTATCTTTGCGGTGGAATACCTCAACTAAAGCTACCTATATGTCAAGGTAAGTCGAAGAAGCAGTTCAAACTCATAATCCTTATTATAATTGTGACTAGCGGTGCTCTTGCTGGTTTTGCAATTTTCATTATCATTTGCAAGAGAAGAAAACATAAAAAGTTATCTTCCACCCCATCATCCCCACATAGTTCTCATTTGAGGGTTTCCTATAAAGAGCTACAAGATGCAACCAATGGATTTTCTTCATCCAATTTGGTTGGTGTTGGAAGCTTTGGTTCGGTATATAAAGGAATTATTCAACAGTTTGAGGGACCTGTTGCTATAAAGGTGCTTAATCTTCAAGCACATGGGGCAACAAAGAGTTTCATCACAGAATGCATGACTCTTAGTAAAATTCGGCATCGAAATCTTTTGAAGATTTTGACATCATGCTCAAGTGTTGATTACAACGACAATGATTTTAAGGCCCTTGTTTTTGAGTTCATGCCTAATGGGAGCTTGGAGAATTGGTTGTCAAAGAACGAACTTGGTGAACCTAGAGATTTATATATGAATTTTAGACAAAGATTGGGTGTAGCTATTGATATAGCTTATGCTTTGGATTACCTTCATCATGATTTTGAGGAAACTATTGTTCATTGTGACATCAAGCCAAGTAATGTTTTTCTTGATGATGGTATGGTCGCACACTTAGGAGACTTTGGATTAGCTAGGCTTCTTCATGAGGTTACAAGCTATTCTAATGAGGGTCAAACTACCACCTCAGCAATTAAGGGAACTATTGGGTATATACCTCCAGAGTATGGAGAAAGTGGCCAAGTTACAACACAAGGGGATATCTACAGCTATGGGGTCCTTCTACTAGTGATGCTCACCGGAAAGAAGCCTACAGATAGCATGTTTCATGAGGATCTAAGCCTACCCAAAATTTGCAAGTTAGCATTGCCAGATCGAGTCGTTGAGATAGTCGATTCAAATTTTCTTGTTCTATCTGAAAGAGACCACAAGGAAGTTATGCAGAATTTAGACTTGGACCAAAAAGTTCTAGGGTCCTTAGCCGACTTCACTAGAATTGGAGTGGCATGTTGTGCGGAATTGCCTAGTGAACGGATAGACATAAAAGAGGTTTTAGTGGAGTTGCTTGCAATTAAGCAAAAGCTATCCACTTTCAACATTGTCATATGA 3048 0.3783 MIRFIITANFLLCIASQILLQTGAAMSSGSEIDRLALLALKDKLTNGVPEALSSWNDSVHFCKWQGVTCNLRHKRVSALTLTNQNFGGTLAPSLGNLTFLKTLNLSSNGLHGQIPKQIGHLRRLMSLDLQTNYLEGEVPLELANCSKLQMILFTYNNLTGKIPLWFGSMQQLTGLGLGINQFHGNIPTSFGNLSFLEKLSLAYNRLEGSIPQSLGGLSNLYLLFLGSNNLSGLIPSSVYNLSRMESLNFPFNYLFGTLPSNIDHAFPNLKSFNVGHNMLTGTIPPSLSNISQLQNIEIYENAFTGLVPISVGRLQNLDRFVISKNNFGSKKGQDLDFLSSITNCSQLQLIDISYNKFSGVLPNSIGNLSSQLQVVSMAVNHIFGSIPNEIGQLGSLYHLSLASNFLQGTIPHSVGKLENLGKLSLRQNQLYGRIPDIFGNLTKLIDLPLNDNNFEGTTPVSLKHCKGMQFLRINQNNLSGNIPNLTFGQLESLIYLDMHSNSLIGSLPSAIGNMKHLVKLDLSENKFSGDIPMEFGECLQLTDLSMSQNFLQGSIPSSISSLKSLINLDLSYNNLSGTIPQELKDLPILENLNLSHNHFYGEVPKGGVFDNITAISLTGNEYLCGGIPQLKLPICQGKSKKQFKLIILIIIVTSGALAGFAIFIIICKRRKHKKLSSTPSSPHSSHLRVSYKELQDATNGFSSSNLVGVGSFGSVYKGIIQQFEGPVAIKVLNLQAHGATKSFITECMTLSKIRHRNLLKILTSCSSVDYNDNDFKALVFEFMPNGSLENWLSKNELGEPRDLYMNFRQRLGVAIDIAYALDYLHHDFEETIVHCDIKPSNVFLDDGMVAHLGDFGLARLLHEVTSYSNEGQTTTSAIKGTIGYIPPEYGESGQVTTQGDIYSYGVLLLVMLTGKKPTDSMFHEDLSLPKICKLALPDRVVEIVDSNFLVLSERDHKEVMQNLDLDQKVLGSLADFTRIGVACCAELPSERIDIKEVLVELLAIKQKLSTFNIVI 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01848 1015 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 69 335 - -
Accr3g01848 1015 SUPERFAMILY L domain-like 31 327 - -
Accr3g01848 1015 Pfam Leucine Rich Repeat 347 368 IPR001611 GO:0005515
Accr3g01848 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Accr3g01848 1015 PANTHER OS04G0122200 PROTEIN 216 1006 - -
Accr3g01848 1015 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Accr3g01848 1015 Gene3D Ribonuclease Inhibitor 334 644 IPR032675 -
Accr3g01848 1015 Pfam Leucine rich repeat 540 599 IPR001611 GO:0005515
Accr3g01848 1015 SUPERFAMILY Protein kinase-like (PK-like) 679 1006 IPR011009 -
Accr3g01848 1015 SMART serkin_6 701 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01848 1015 Gene3D Ribonuclease Inhibitor 30 181 IPR032675 -
Accr3g01848 1015 ProSitePatterns Protein kinases ATP-binding region signature. 707 730 IPR017441 GO:0005524
Accr3g01848 1015 Gene3D Transferase(Phosphotransferase) domain 1 783 1012 - -
Accr3g01848 1015 SMART LRR_typ_2 97 121 IPR003591 -
Accr3g01848 1015 SMART LRR_typ_2 562 585 IPR003591 -
Accr3g01848 1015 SMART LRR_typ_2 586 611 IPR003591 -
Accr3g01848 1015 SMART LRR_typ_2 217 240 IPR003591 -
Accr3g01848 1015 SMART LRR_typ_2 417 440 IPR003591 -
Accr3g01848 1015 SMART LRR_typ_2 193 216 IPR003591 -
Accr3g01848 1015 SMART LRR_typ_2 490 514 IPR003591 -
Accr3g01848 1015 ProSiteProfiles Protein kinase domain profile. 701 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01848 1015 Gene3D Phosphorylase Kinase; domain 1 683 782 - -
Accr3g01848 1015 SUPERFAMILY L domain-like 370 625 - -
Accr3g01848 1015 FunFam LRR receptor-like serine/threonine-protein kinase EFR 336 641 - -
Accr3g01848 1015 Gene3D Ribonuclease Inhibitor 182 333 IPR032675 -
Accr3g01848 1015 Pfam Protein kinase domain 703 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01848 1015 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 783 1012 - -
Accr3g01848 1015 FunFam LRR receptor-like serine/threonine-protein kinase EFR 672 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01848 Accr-Chr3 25253117 25256378 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01848 31 1007 Receptor kinase-like Gene Family AT3G47570 43.290 0.0 772
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Accr3g01848 Pkinase 9.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01848 - - ahf:112766919 1006.13