Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01844 ATGAATTCAGGGTCCTTAATTTCCTTTGCTTCATCAAACTCTGCATCGAGAGAAGATAGAGTGGCTAGTACCAGAACCAGGCCTTCTCCTCATAATCCAAGGCCTTCTTTTTTGATTCGGATGGCCATGAGAATATCAAGAGCAAGATGGTTCACCTTCTTAAGAAGAGTTTTCCATTACCAGAATGGGTCAAGGTCTGATCTTGGCTCCAATCCTTTCAATTCCAGCACTTGGATGACTTTAGAGTTCATTGCTCTGATGGTTCAGATAAGCCTCACAACCTTGGTTTTGGCCATTTCTAAGACGGAGAGACCTGTTTGGCCTATGAGGATTTGGATTTCTGGTTATGATATTGGTTGTCTTCTCAATCTGTTGCTTCTTTATGGTCGATATCGTCAGCTTTATGTGTCTCATGGTGATGCTCTTAGCCTCTCTGATATGGAACAACAGAGAGGCAATGAAGAAACCAGGTGTTCACATTTAATGAACAAATGCCGGACTTCGCTCGAGCTGTTCTTCGCTATATGGTTTGTGATGGGAAATGTTTGGGTTTTCGACTCACGTTTCGGGTCATTCCAAAGAGCGCCAAAGCTGCACGTGCTCTGCATCTCCTTGATTGCTTGGAATGCCATAACCTACTCGTTCCCTTTCCTTCTCTTCCTCCTGCTTTGTTGCTTTGTGCCTCTGATCAGCACCCTCCTCGGTTACAACATGAACATGGCTTCTTCTGATAAGGGAGCTTCTGATGATCAAATCTCACAGCTCCCAAGTTGGAGATACAAACAAGTTCATAACAAGTTGGACAATGGCCATGATTCTGCAGCCAGAGAAGGAATGATCAATGAAGATCCTGAATGTTGCATTTGCTTAACCAAATACAAAGACAGAGAAGACGTGAGGCAATTGCCATGTTCTCATATGTTTCACCAAAAATGTGTGGATCATTGGCTCAGAATCATATCTTGTTGCCCTCTATGTAAACAAGGATTACAGAGATAG 999 0.4314 MNSGSLISFASSNSASREDRVASTRTRPSPHNPRPSFLIRMAMRISRARWFTFLRRVFHYQNGSRSDLGSNPFNSSTWMTLEFIALMVQISLTTLVLAISKTERPVWPMRIWISGYDIGCLLNLLLLYGRYRQLYVSHGDALSLSDMEQQRGNEETRCSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPKLHVLCISLIAWNAITYSFPFLLFLLLCCFVPLISTLLGYNMNMASSDKGASDDQISQLPSWRYKQVHNKLDNGHDSAAREGMINEDPECCICLTKYKDREDVRQLPCSHMFHQKCVDHWLRIISCCPLCKQGLQR 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01844 332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 235 331 IPR013083 -
Accr3g01844 332 SUPERFAMILY RING/U-box 276 330 - -
Accr3g01844 332 SMART ring_2 286 326 IPR001841 -
Accr3g01844 332 ProSiteProfiles Zinc finger RING-type profile. 286 327 IPR001841 -
Accr3g01844 332 Pfam Ring finger domain 285 327 IPR001841 -
Accr3g01844 332 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 10 330 - -
Accr3g01844 332 MobiDBLite consensus disorder prediction 1 19 - -
Accr3g01844 332 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01844 Accr-Chr3 25106719 25109451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01844 37 330 C3H Transcription Factor Family AT4G26580 71.959 7.64e-153 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01844 - - gmx:100813670 526.554