Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01838 ATGGCTTCATTATCTTCCGCTAACTCCTCTTCTCGATCTCCAAAGAAATATGATGTTTTTATTAGCTTTAGAGGTGAGGACACCCGCTTCAATTTCACTAGCCATCTTCATGATGCTCTTCAAAAAAGCCAATTGGATACATACATTGACTACAGGCTCAAAAAAGGAGATGAGGTATGGCCATCTCTTGAGAGTGCTATTGAAGATTCAACTCTGTTCCTTGTGATCTTCTCAGAAAACTATGCATCTTCCACATGGTGCTTGAAGGAGCTTACAAAAATATTCGACTGCTCCAAAAATCAAGATTACCTCGTTATTCCAGTGTTCTATAGGGTAGATCCTTCACATGTGAGGAATCAGTCTGGGAGTTACCAGAAAGCATTTGAAAAACATGAGAACAAAGGCATCAACAATAACCAATTGCAAATTTGGAGAGAGGCTCTCACTCATGCTGCAAATATAGCAGGTTGGACTTGTAGCTTGGATAGGAATGAAGCAGAACTAATTAAAGAAATAATGAATTGTATTGTAACAAAGTTGGGCCCTAAGTATCAAAGTGAAGATTATCTAAAAGGCTTGATTGGAATTCATAAAAGAATGGCATATGTAGAATGTTTGTTGGACAATGGTTCAAACAATGTCCAATTTATTGCCATTTGGGGCATGGGTGGTATAGGTAAAACAACTCTTGCAGAAGCATTGTTTCACAAATTGCGTTTTGATTATGAAGGATTTTGCTTTTTGGCTAATGTAAGGGAAAAATCAAAGAAATTTGGAATAGATTCTTTGAGGGAAAAACTTATTTTGAAGTTATTACAGGATAGAGAATCTTCCATTGGCATGCATGATGCAATATATCCTTATGTCATGAGTAGACTTGGTCAGAAAAAAGTTCTCATTGTTCTTGATGACGTTGATGATGTTGAGCAATTAAAAATTTTAGCTAAAAGACAAGAGTTTGGATTAGGCAGTAAAATCTTGATAACAACTAGAGATAAGCAAACGCTTGGTAATGAAGTAGATGATATTTATGTGCTTGAGGCTTTGAATCGTGATGAAGCTTTTGATCTGATCTCCATCAATGCCTTTGGAAATGACTATGTTGACCCAAAGATAAGAAAGCTAGCAGTACAAGTGACTCAATATGCAAGTGGAAATCCATTGGCCTTAAAAGTTTTAGGTTCCTTCTTGCATGGCAAAAATCATGTAGCATGGGAAAGCCAATTGGACAAGCTTCAAAAATTACCTTGTCTAAAAATTAATGATATCCTCAAAATGAGTTTAGAAGGACTTGATTGTGAGGAGAAAAATATTTTCTTTGATATTGCATGTTTTTTCAATTATTTTGACGTGGAGGATGTAATAAAATTGTTAGATGCATGTGGATATTCAACCATTATCGGATTGAAAACTCTTGAAGATAAAGCACTTCTTGATATACATGATGGGAGTATATATATGCATCATCTGATAAAAGAAATGGGTCGACAAACTGTTCGTGAAGAATCATTAAATGATCCCAAAAGGCGTAGTCGGTTATGGAATTCTAATGAAATTTCTAAAATATTGAAGGAAAACATGGGAAGTGAAACCATTGAAGGCATAACTCTAAACCTTTCAGAAGTTGAAGATATGTGCTTAAGTGCTCAAGCCTTTTGTTCAATGCCCAATCTAAAGTTCCTTGATTTTCATAAAAATTTCAATGTTGATGAGGTTGGGAGCAAGTTACAATTTCCCTGTGGTTTAGAGTTTTTGCCAGATAAACTCAGACTATTACGTTGGGAGGAATGCCCTTTAAAGTCCTTGCCAGCAACATTCAAGGCTGAACATCTTGTTAAAATTATAATGCCCTACAGCAATTTGACAAAATTTTGGGATGGGGTGCAGAATCTCGTGAATTTATGCAAAATTGATCTTACTGGATCACATGACTTGATTGAGCTTCCAGATTTTTCCAAAGCCATACATCTTGCAGAAGTTCATCTCCATTATTGTTTTAAATTACAGAGTGTTCATCCGTCTATTTTATCTCTCCATAGCCTTCGTCGTTTAGGGCTAATGCGCTGTAAATCCCTTACCAGCCTTATAAGCAATACCCATCTCAAATCACTTATTGATCTCAACCTGGAAAGATGCTCAAGACTAAACAAATTTTCAGTGACCTCAGAAAATCATGAGTTTGAATTGTATCTTTCAAGCACACTCATCAATGATGAGTTGTGCTCGTCAAGTGGGTGTCTTAGCAAACTTGATACATTGCGTCTAAACGACTGCAAAAGTGTGAAATCTCTTCCCTACAAATTGAGTGACCTACGAAACCTTCGACGTCTTGAGGCGAATCGTTGTAATAAGTTAGCACCAAATCTACGTTCCATATTTGATGAAGTGCGTGCTTTGGAAGTTCTAGCATTGGAGGATTGTAGTGAGTTATTTGAACTGCCTGATAATATTAGCTTCTTGTCGTCATTACGTGAGTTACATCTCAAAGGGACTAATATAGAGACTTTGCCTTTAAGCATCAAATATCTTTCAAGACTGCAACGTCTTGACTTGGATGGATGCAAAAGGCTTCGGTCTCTACCAGAACTCCCCCCCTCTATCTTTTCTATGACCACTGTGAGCTGCCTATCCCTTGGGACCCTAGATTTTCTTTTAACCAATGAAAGTGAAGAAGTAAAACACATATATGATGATTATGGACGTGGACAGTTTGCTTTGTTTAACTTCTTGAATTGCATGAAGTTGGATCAACAATCAATCAAAGCTGCTATGGCCAAAGTGGTGCTTGGGAATCATAAAGGCATTTATGGCACCGTTTACATGCAATATCCAGGAAAAATAGTTCCAAAGTGGTTTATGTATAGGACTACACAGAATGTTGTAACTATAGATCTCAATTTGATTCCACAACCTTGGGATGACAGTTTCATTTTTTGTGTCGCCTTTTCTAAGTCAACACCGGGCGCGTACATTTTTGCGGCATGGTTTATTGATGGTGAATATGCTTGCCCAGCTGAACTTTTGTTACGTACGGATGAGTTCACATTGTCAGATCATGTTTTTCTTTGGAGTGATCGAAATTCTTTTGGAGAAGTACAGAGGAAAATTGCAGAAAAGAAAAGAGATGCTCAAACCAACACTTATCATCCATTGCTTCAAATTGCATTCGGAGTGGACATTTCCATGGCTCATTATAAGGAAGCAAGAAAGATCAAAGAGTGTGGGGTATGCCCAACATCTGCCCTTGAATATCAAAATTACATTCAACAAATTCAATTACAATCGTTGCAACCACATCCTAAATCTATTGCAATGGAAGCAGCCTCTCGAAAGCGCAAATATCACAGCTTACTTCGATGA 3360 0.372 MASLSSANSSSRSPKKYDVFISFRGEDTRFNFTSHLHDALQKSQLDTYIDYRLKKGDEVWPSLESAIEDSTLFLVIFSENYASSTWCLKELTKIFDCSKNQDYLVIPVFYRVDPSHVRNQSGSYQKAFEKHENKGINNNQLQIWREALTHAANIAGWTCSLDRNEAELIKEIMNCIVTKLGPKYQSEDYLKGLIGIHKRMAYVECLLDNGSNNVQFIAIWGMGGIGKTTLAEALFHKLRFDYEGFCFLANVREKSKKFGIDSLREKLILKLLQDRESSIGMHDAIYPYVMSRLGQKKVLIVLDDVDDVEQLKILAKRQEFGLGSKILITTRDKQTLGNEVDDIYVLEALNRDEAFDLISINAFGNDYVDPKIRKLAVQVTQYASGNPLALKVLGSFLHGKNHVAWESQLDKLQKLPCLKINDILKMSLEGLDCEEKNIFFDIACFFNYFDVEDVIKLLDACGYSTIIGLKTLEDKALLDIHDGSIYMHHLIKEMGRQTVREESLNDPKRRSRLWNSNEISKILKENMGSETIEGITLNLSEVEDMCLSAQAFCSMPNLKFLDFHKNFNVDEVGSKLQFPCGLEFLPDKLRLLRWEECPLKSLPATFKAEHLVKIIMPYSNLTKFWDGVQNLVNLCKIDLTGSHDLIELPDFSKAIHLAEVHLHYCFKLQSVHPSILSLHSLRRLGLMRCKSLTSLISNTHLKSLIDLNLERCSRLNKFSVTSENHEFELYLSSTLINDELCSSSGCLSKLDTLRLNDCKSVKSLPYKLSDLRNLRRLEANRCNKLAPNLRSIFDEVRALEVLALEDCSELFELPDNISFLSSLRELHLKGTNIETLPLSIKYLSRLQRLDLDGCKRLRSLPELPPSIFSMTTVSCLSLGTLDFLLTNESEEVKHIYDDYGRGQFALFNFLNCMKLDQQSIKAAMAKVVLGNHKGIYGTVYMQYPGKIVPKWFMYRTTQNVVTIDLNLIPQPWDDSFIFCVAFSKSTPGAYIFAAWFIDGEYACPAELLLRTDEFTLSDHVFLWSDRNSFGEVQRKIAEKKRDAQTNTYHPLLQIAFGVDISMAHYKEARKIKECGVCPTSALEYQNYIQQIQLQSLQPHPKSIAMEAASRKRKYHSLLR 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01838 1119 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 157 IPR035897 -
Accr3g01838 1119 ProSiteProfiles TIR domain profile. 15 180 IPR000157 GO:0007165
Accr3g01838 1119 SMART till_3 16 154 IPR000157 GO:0007165
Accr3g01838 1119 Gene3D - 348 432 IPR042197 -
Accr3g01838 1119 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 875 IPR044974 GO:0006952
Accr3g01838 1119 PRINTS Disease resistance protein signature 841 857 - -
Accr3g01838 1119 PRINTS Disease resistance protein signature 292 306 - -
Accr3g01838 1119 PRINTS Disease resistance protein signature 383 397 - -
Accr3g01838 1119 PRINTS Disease resistance protein signature 216 231 - -
Accr3g01838 1119 Gene3D - 14 187 IPR035897 -
Accr3g01838 1119 Gene3D - 191 342 IPR027417 -
Accr3g01838 1119 Pfam NB-ARC domain 206 417 IPR002182 GO:0043531
Accr3g01838 1119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 442 IPR027417 -
Accr3g01838 1119 Pfam TIR domain 16 194 IPR000157 GO:0007165
Accr3g01838 1119 Pfam Leucine Rich Repeat 610 629 IPR011713 -
Accr3g01838 1119 SUPERFAMILY L domain-like 487 880 - -
Accr3g01838 1119 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 181 - -
Accr3g01838 1119 Gene3D Ribonuclease Inhibitor 723 894 IPR032675 -
Accr3g01838 1119 Gene3D Ribonuclease Inhibitor 490 722 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01838 Accr-Chr3 24988953 24993103 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01838 740 878 WRKY Transcription Factor Family AT4G12020 29.012 1.19e-08 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01838 - - pcin:129290874 1107.05