Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01830 ATGGCTTCATCATCTTCCGCTAACTCATCTTCTCAATCTCCAAAGAAATATGATGTATTTATTAGCTTTAGAGGTGAGGACACCCGCTTCAATTTTACCAGCCATCTTCATGATGCTCTTCGAAGAAACCAATTGGATACATACATCGACTACAGGCTCGAAAAGGGAGATGAGGTATGGCCATCTCTTGAGAGAGCTATTGAAGATTCAACTCTGTTCCTTGTGATCTTCTCAGAAAACTATGCATCTTCTACGTGGTGCTTGAAGGAGCTTACAAAAATATTTGATTGCTCCAAAAATCAAGATCACCTCATTATTCCAGTGTTCTATAGGGTAGATCCTTCACATGTGAGGAAGCAGTCTGGGAGTTACCAGAAAGCATTTGAAGAACATGAGAACAAAGGCATCAACACGCACCAATTGCAAATCTGGAGAGGGGCTCTAACTCATGCTGCAAATTTAGCAGGTTGGAGTTGCAGCTTGGATAGGAATGAAGCAGAGCTAATTAAAGAAATAATGAAATGTGTTGTAACAAAGTTGGGCCCTAAGTATCAAAGTGAAGATTATCTAAAAGGCTTGATTGGAATTCATAAAAGAATGGCATATGTAGAATTTTTGTTAGACAATGGTTCAAACAATGTCCAATATATTGCCATTTGGGGCATGGGTGGTATAGGCAAAACAACTCTTGCAAAAGCATTGTTTCACAAATTGCGTTTTGATTATGAAGGGTTTTGCTTTTTGGCTAATGTAAGGGAAGAATCAAAGAAATATGGAATAGATTCTTTGAGGGAAAAACTTATTTTAAAGTTATTACGGGAAAGAGAATCTCCCATTGGTATGCTTGATGCAATATATCCTTATGCCATGCGTAGACTTGGTCGGAAGAAAGTTTTCATTGTTCTTGATGACGTTGATGATGTTGAGCAATTAAAAATTTTAGCCAAAAGACATGAGTTTGGATCAGGCAGTAAAATCTTGATAACAACTAGAGATAAACAAGTGCTTGGTAATGAAGTAGATGATATATATGTGCTTGAAGGTCTAAATGATGATGAAGCTTTTGATCTATTCTCCATCAATGCCTTTGGAAATGGCTATGTTGACCCAAAGATAAGAGAGCTAGCAGTAAAAGTGACTCAATATGCAACTGCAAATCCATTGGCTCTAAAAGTTTTAGGTTCCTTGTTGCATGGCAAAAATCAAGTTGCATGGGAAAGCCAATTGAACAAGCTTCAAAAATTACCTTGTCCAAAAATTAATGATATCCTCAAAATGAGTTTGGAAGGACTTGATTATGAGGAGAAAAATATTTTCTTGGATATTGCATGTTTTTTCAGTTATTCTTATGTGGAGGATGTAATAAAATTGTTAGATGCATGTGGATATTCAACCATTATCGGATTGAAAAGTCTTGAAGATAAAGCACTTCTTGAAACTCATGATGGAAGAATACATATTCACCATTTGATAATAGAAATGGCTCGACAAACTATTCGTGAAGAATCATTAAATGATCCTAAAAGGCGCAGTCGGTTATGGAATTCTAACGAAATTTCTGAAATATTGAAGGAAAACATGGGAAGTGAAACCATTGAAGGCATAAATCTAAACCTTTCAGAAGTTGAAGATATTTGCTTAAGTCCTCAAGCCTTTTGTTCATTGCCCAATCTAAAGTTCCTTGATTTTCATACAAATTTCAATGTTCATAAGGTCGGGAACAAGTTACAATTTCCCTGTGGCATGGAGTTTTTACCAAATAAACTCAGACTATTGCGTTGGGAGGAATACCCTTTAAAGTCCTTGCCAGCAACATTCAAGCCTGAACATCTTGTTGAAATTAGGATGCGCAACAGCAATTTGACAAAATTTTGGGATGGGGTGCAGAATCTTGTGAATTTAAGTAATATTGATCTTTCTGGATCAAAAGACTTGATTGAGCTCCCAGATTTTTCCAAGGCTATCCATCTTGCAGAAGTTCATCTCAATCATTGTTTGGAATTACAGAGTGTTCATCCATCTATTTTATCTCTTGATAGCCTTCGTCGTTTAAGTCTATATCACTGCAAAGCCCTTACCAGCCTTACAAGCAATACCCACCTCAAATCACTTATTGATCTCGACCTGGAAGGATGCTCAAGACTGAACAAATTTTCAATGACTTCAGAAAATTGTGAGTTTAAATTGAATCTTTCTAGCACACCCATCAATGATGAGTTGTGCTCATCAAGTGGGTGTCTTAGCAAACTTGATTCATTGTTTCTAGACGAATGCGAAAGTGTGAAAAGTCTTCCCTACAAATTGATTGATCTACGAAACCTCCGACGTCTTCATGCTAAGCGTTGTAATAAGTTAGTACCAAACCTACATTCCATATTTGATGAAGTGTGCGCTTTGGAAGTTCTACGGTTGGAGAATTGTAGTGAGTTATTTGAACTGCCTGACAATATTAGCTTGTTATCGTCATTACGTGAGTTACGTCTCAAAGAGACAAATATAGAGACTTTGCCTTCAAGCATCAAACTTCTTTCAAGCCTGCAACATCTTGACTTGAAAGGATGCGAAAGGCTTCGATTTCTACCAAAACTCCCTCCCTCTATCTCTTATATGATCACTACGAACTGCCTATCCCTTGGGACCCTAGATTTTCTTTTAACCAATGAAGGTGAAGAAGTAAAACACATATATGAAGATCTTACTCACTTTGACTTCTTGAATTGCATGAAGTTGGATCAACAATCAATCAAATCTGCTATGGCCAAAGTGGTACTTGGGATTCATAAAGGCATTTATGGCACCGTTTACATGCACTATCCGGGGAAAATAGTTCCAAAGTGGTTCATGTATAGGACTACACAGAATTATATAACTATAGATCTCAGTTCGATTCCACAACCTTGGGATGGCACTTTCATTTTCTATGTCGCCTTTTCTAAGTCAACACCAGACACAAAGATTTATCCGATATGGTTTATTGATGGTGAATTTGCTTGTCTGGCTGAATATTCATCAGATACTGATGATTTCACATTGTCGGATCATGTTTTTCTTTGGAATGATCGAAATTCTTTTAGAGAAGTACAAACGAAAATTGAAGAGAAGAAAAGAGATGCTCAGACCAGCACTTATCATCCATTGCTTGAAATTGCATTCAGAGTGAAAGTGAGCATTTTCTCGATTCGTTATAACGGAAAGGAAACAGGAGAGATCATAGAGTGTGGGGTATGCCCAACATCTGCCCTTGAATATCAAAATTACATTCAACAAATTCAATTACCATTGCAACCAAATCCTAAATCTATTGCAATGGAAGCGGCCTCTCGAAAGCGCAAATATCATAGCTTACTTCGATGA 3354 0.3715 MASSSSANSSSQSPKKYDVFISFRGEDTRFNFTSHLHDALRRNQLDTYIDYRLEKGDEVWPSLERAIEDSTLFLVIFSENYASSTWCLKELTKIFDCSKNQDHLIIPVFYRVDPSHVRKQSGSYQKAFEEHENKGINTHQLQIWRGALTHAANLAGWSCSLDRNEAELIKEIMKCVVTKLGPKYQSEDYLKGLIGIHKRMAYVEFLLDNGSNNVQYIAIWGMGGIGKTTLAKALFHKLRFDYEGFCFLANVREESKKYGIDSLREKLILKLLRERESPIGMLDAIYPYAMRRLGRKKVFIVLDDVDDVEQLKILAKRHEFGSGSKILITTRDKQVLGNEVDDIYVLEGLNDDEAFDLFSINAFGNGYVDPKIRELAVKVTQYATANPLALKVLGSLLHGKNQVAWESQLNKLQKLPCPKINDILKMSLEGLDYEEKNIFLDIACFFSYSYVEDVIKLLDACGYSTIIGLKSLEDKALLETHDGRIHIHHLIIEMARQTIREESLNDPKRRSRLWNSNEISEILKENMGSETIEGINLNLSEVEDICLSPQAFCSLPNLKFLDFHTNFNVHKVGNKLQFPCGMEFLPNKLRLLRWEEYPLKSLPATFKPEHLVEIRMRNSNLTKFWDGVQNLVNLSNIDLSGSKDLIELPDFSKAIHLAEVHLNHCLELQSVHPSILSLDSLRRLSLYHCKALTSLTSNTHLKSLIDLDLEGCSRLNKFSMTSENCEFKLNLSSTPINDELCSSSGCLSKLDSLFLDECESVKSLPYKLIDLRNLRRLHAKRCNKLVPNLHSIFDEVCALEVLRLENCSELFELPDNISLLSSLRELRLKETNIETLPSSIKLLSSLQHLDLKGCERLRFLPKLPPSISYMITTNCLSLGTLDFLLTNEGEEVKHIYEDLTHFDFLNCMKLDQQSIKSAMAKVVLGIHKGIYGTVYMHYPGKIVPKWFMYRTTQNYITIDLSSIPQPWDGTFIFYVAFSKSTPDTKIYPIWFIDGEFACLAEYSSDTDDFTLSDHVFLWNDRNSFREVQTKIEEKKRDAQTSTYHPLLEIAFRVKVSIFSIRYNGKETGEIIECGVCPTSALEYQNYIQQIQLPLQPNPKSIAMEAASRKRKYHSLLR 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01830 1117 Gene3D - 192 343 IPR027417 -
Accr3g01830 1117 Pfam TIR domain 16 194 IPR000157 GO:0007165
Accr3g01830 1117 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 157 IPR035897 -
Accr3g01830 1117 ProSiteProfiles TIR domain profile. 15 180 IPR000157 GO:0007165
Accr3g01830 1117 SMART till_3 16 154 IPR000157 GO:0007165
Accr3g01830 1117 PRINTS Disease resistance protein signature 216 231 - -
Accr3g01830 1117 PRINTS Disease resistance protein signature 699 715 - -
Accr3g01830 1117 PRINTS Disease resistance protein signature 383 397 - -
Accr3g01830 1117 PRINTS Disease resistance protein signature 292 306 - -
Accr3g01830 1117 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 181 - -
Accr3g01830 1117 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 766 IPR044974 GO:0006952
Accr3g01830 1117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 442 IPR027417 -
Accr3g01830 1117 Gene3D - 14 187 IPR035897 -
Accr3g01830 1117 Gene3D - 348 432 IPR042197 -
Accr3g01830 1117 Pfam Leucine Rich Repeat 610 629 IPR011713 -
Accr3g01830 1117 Pfam NB-ARC domain 205 417 IPR002182 GO:0043531
Accr3g01830 1117 SUPERFAMILY L domain-like 537 883 - -
Accr3g01830 1117 SUPERFAMILY "Winged helix" DNA-binding domain 419 524 IPR036390 -
Accr3g01830 1117 Gene3D Ribonuclease Inhibitor 491 727 IPR032675 -
Accr3g01830 1117 Gene3D Ribonuclease Inhibitor 728 923 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01830 Accr-Chr3 24620195 24624417 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01830 748 878 WRKY Transcription Factor Family AT4G12020 35.075 1.92e-06 50.4