LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr3g01826	ATGGCTGCTAAATCTGTTGTAGACTTAATAGAGTCATCCTCCGGGGTTCATTATTCAGGGTTTCACATGGATGCTTTAAATAAAATAAATGCTGGAACTGTGCCTCCAACAACTTCTGTAGCTGACCACATGTATAATCAACCTTTTGTCATAGGTGTTGCTGGTGGGGCTGCAGCTGGGAAAACTGAAGTTTGCAATATGATTATTCAGCAACTTCATGACCAACGAGTTGTAGTTGTTAATCAGGATTCTTTCTATCATAATTTGACGGAGGAGGAACTTACAAGAGTACAAGATTACAACTTTGATCATCCTGATGCTTTTGATACTGAGCAATTGCTTGGGGTTATGGACAAATTGAAGCATGGACAAGCTGTAGATATTCCAAATTATGACTTCAAGAGTTATAAAAGCCATGCATTTCCAGCTAGACGGGTAAACCCTTCTGATGTAATAATTTTGGAAGGAATTCTTATTTTCCATGATCCACGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGACTGGCTAGGAGGATCAAGCGTGATACGGTTCAGAAGAGTCGGGATATTGGTACTGTGCTTGATCAGTATTCTAAATTTGTAAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTATGCCGATATCATTATTCCCCGTGGAGGAGACAATCATGTAGCAATTGATTTAATTGTACAGCATATCCGCACAAAACTTGGTCAGCATGATCTATGTAAAATATACCCTAACCTTTATGTTATCCAATCAACTTTTCAGATACGGGGTATGCATACCCTGATACGTGATTGTCAAATAAAAACGCATGATTTTGTGTTTTATTCTGACCGTTTGATTCGTCTGGTTGTTGAACATGGCCTGGGACATCTACCATTTACAGAAAAGCAAATAATCACTCCGACTGGGTCTGTGTACACTGGTGTCGATTTCTGTAAGAGGTTATGTGGAGTCTCCGTCATCAGGAGTGGGGAGAGTATGGAGAATGCCTTACGAGCATGCTGTAAAGGTATCAAGATTGGCAAAATTCTTATTCATAGAGAAGGGGAAGGAGACAACAGTCAGCAGCTGATATATGAAAAATTGCCTAATGATATCTCAGATAGGCATGTGTTACTGTTGGATCCCATTCTAGGCACAGGAAATTCGGCTGTTCAAGCAATTAATTTGCTCATAAAAAAGGGTGTACCAGAGTCCAACATTATATTTCTCAATCTCATATCGGCACCCCAAGGTGTGCATGTGGTCTGCAAAGCCTTTCCCAGAATAAAAATCGTGACATCTGAGATTGAACTGGGCCTGAATAAAGACTACCGTGTTGTGCCGGGCATGGGCGAGTTTGGGGACCGGTATTTTGGCACAGATGATGATCAGCAGGTCGTGGTCCCTTCACAGTAG	1443	0.4089	MAAKSVVDLIESSSGVHYSGFHMDALNKINAGTVPPTTSVADHMYNQPFVIGVAGGAAAGKTEVCNMIIQQLHDQRVVVVNQDSFYHNLTEEELTRVQDYNFDHPDAFDTEQLLGVMDKLKHGQAVDIPNYDFKSYKSHAFPARRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIKRDTVQKSRDIGTVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDCQIKTHDFVFYSDRLIRLVVEHGLGHLPFTEKQIITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGEGDNSQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAINLLIKKGVPESNIIFLNLISAPQGVHVVCKAFPRIKIVTSEIELGLNKDYRVVPGMGEFGDRYFGTDDDQQVVVPSQ	480

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr3g01826	480	FunFam	Uridine kinase	252	469	-	-
	Accr3g01826	480	Gene3D	-	252	469	IPR029057	-
	Accr3g01826	480	NCBIfam	uridine kinase	47	248	IPR000764	-
	Accr3g01826	480	SUPERFAMILY	PRTase-like	251	470	IPR029057	-
	Accr3g01826	480	FunFam	Uridine kinase	45	251	-	-
	Accr3g01826	480	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	42	241	IPR027417	-
	Accr3g01826	480	CDD	PRTases_typeI	325	442	IPR000836	-
	Accr3g01826	480	Pfam	Phosphoribulokinase / Uridine kinase family	50	236	IPR006083	GO:0005524\|GO:0016301
	Accr3g01826	480	Pfam	Uracil phosphoribosyltransferase	266	469	-	-
	Accr3g01826	480	CDD	UMPK	61	248	IPR000764	-
	Accr3g01826	480	PANTHER	URIDINE KINASE	42	379	-	-
	Accr3g01826	480	Gene3D	-	45	251	IPR027417	-
	Accr3g01826	480	PRINTS	Uridine kinase signature	194	205	-	-
	Accr3g01826	480	PRINTS	Uridine kinase signature	180	190	-	-
	Accr3g01826	480	PRINTS	Uridine kinase signature	78	89	-	-
	Accr3g01826	480	PRINTS	Uridine kinase signature	216	229	-	-
	Accr3g01826	480	PRINTS	Uridine kinase signature	123	138	-	-
	Accr3g01826	480	PRINTS	Uridine kinase signature	48	65	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr3g01826	Accr-Chr3	24509158	24517926	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr3g01826	1	472	PRT Gene Family	AT4G26510	82.452	0.0	804

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr3g01826	K00876		-	gmx:100798205	830.476