Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01825 ATGTCTCTGCCAATGGCTGCTAAATCTGTTGTAGACTTAATAGAGTCATCCTCCGGGGTTCATTATTCAGGGTTTCACATGGATGCTTTAAATAAAATAAATGCTGGAACTGTGCCTCCAACAACTTCTGTAGCTGACCACATGTATAATCAACCTTTTGTCATAGGTGTTGCTGGTGGGGCTGCAGCTGGGAAAACTGAAGTTTGCAATATGATTATTCAGCAACTTCATGACCAACGAGTTGTAGTTGTTAATCAGGATTCTTTCTATCATAATTTGACGGAGGAGGAACTTACAAGAGTACAAGATTACAACTTTGATCATCCTGATGCTTTTGATACTGAGCAATTGCTTGGGGTTATGGACAAATTGAAGCATGGACAAGCTGTAGATATTCCAAATTATGACTTCAAGAGTTATAAAAGCCATGCATTTCCAGCTAGACGGGTAAACCCTTCTGATGTAATAATTTTGGAAGGAATTCTTATTTTCCATGATCCACGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGACTGGCTAGGAGGATCAAGCGTGATACGGTTCAGAAGAGTCGGGATATTGGTACTGTGCTTGATCAGTATTCTAAATTTGTAAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTATGCCGATATCATTATTCCCCGTGGAGGAGACAATCATGTAGCAATTGATTTAATTGTACAGCATATCCGCACAAAACTTGGTCAGCATGATCTATGTAAAATATACCCTAACCTTTATGTTATCCAATCAACTTTTCAGATACGGGGTATGCATACCCTGATACGTGATTGTCAAATAAAAACGCATGATTTTGTGTTTTATTCTGACCGTTTGATTCGTCTGGTTGTTGAACATGGCCTGGGACATCTACCATTTACAGAAAAGCAAATAATCACTCCGACTGGGTCTGTGTACACTGGTGTCGATTTCTGTAAGAGGTTATGTGGAGTCTCCGTCATCAGGAGTGGGGAGAGTATGGAGAATGCCTTACGAGCATGCTGTAAAGGTATCAAGATTGGCAAAATTCTTATTCATAGAGAAGGGGAAGGAGACAACAGTCAGCAGCTGATATATGAAAAATTGCCTAATGATATCTCAGATAGGCATGTGTTACTGTTGGATCCCATTCTAGGCACAGGAAATTCGGCTGTTCAAGCAATTAATTTGCTCATAAAAAAGGGTGTACCAGAGTCCAACATTATATTTCTCAATCTCATATCGGCACCCCAAGGTGTGCATGTGGTCTGCAAAGCCTTTCCCAGAATAAAAATCGTGACATCTGAGATTGAACTGGGCCTGAATAAAGACTACCGTGTTGTGCCGGGCATGGGCGAGTTTGGGGACCGGTATTTTGGCACAGATGATGATCAGCAGGTCGTGGTCCCTTCACAGTAG 1455 0.4096 MSLPMAAKSVVDLIESSSGVHYSGFHMDALNKINAGTVPPTTSVADHMYNQPFVIGVAGGAAAGKTEVCNMIIQQLHDQRVVVVNQDSFYHNLTEEELTRVQDYNFDHPDAFDTEQLLGVMDKLKHGQAVDIPNYDFKSYKSHAFPARRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIKRDTVQKSRDIGTVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDCQIKTHDFVFYSDRLIRLVVEHGLGHLPFTEKQIITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGEGDNSQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAINLLIKKGVPESNIIFLNLISAPQGVHVVCKAFPRIKIVTSEIELGLNKDYRVVPGMGEFGDRYFGTDDDQQVVVPSQ 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01825 484 PANTHER URIDINE KINASE 46 383 - -
Accr3g01825 484 SUPERFAMILY PRTase-like 255 474 IPR029057 -
Accr3g01825 484 Pfam Uracil phosphoribosyltransferase 270 473 - -
Accr3g01825 484 FunFam Uridine kinase 256 473 - -
Accr3g01825 484 FunFam Uridine kinase 49 255 - -
Accr3g01825 484 PRINTS Uridine kinase signature 82 93 - -
Accr3g01825 484 PRINTS Uridine kinase signature 127 142 - -
Accr3g01825 484 PRINTS Uridine kinase signature 184 194 - -
Accr3g01825 484 PRINTS Uridine kinase signature 220 233 - -
Accr3g01825 484 PRINTS Uridine kinase signature 52 69 - -
Accr3g01825 484 PRINTS Uridine kinase signature 198 209 - -
Accr3g01825 484 Pfam Phosphoribulokinase / Uridine kinase family 54 240 IPR006083 GO:0005524|GO:0016301
Accr3g01825 484 NCBIfam uridine kinase 51 252 IPR000764 -
Accr3g01825 484 CDD PRTases_typeI 329 446 IPR000836 -
Accr3g01825 484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 245 IPR027417 -
Accr3g01825 484 CDD UMPK 65 252 IPR000764 -
Accr3g01825 484 Gene3D - 256 473 IPR029057 -
Accr3g01825 484 Gene3D - 49 255 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01825 Accr-Chr3 24509158 24518098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01825 5 476 PRT Gene Family AT4G26510 82.452 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01825 K00876 - gmx:100798205 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01627 4 17074183 17079359 Accr3g01825 3 24509158 24518098 CCT
Accr3g01825 3 24509158 24518098 Accr3g01825 3 24509158 24518098 ECH