Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01813 ATGGGCGATTCAACGTGCAGAGTGGAAACAACCTCTCGTCTTGCCCAATGGAGAATCGACAACTCGGCTACCTGCACTTACAGAAAGTCTGATCCTTTCAAGATTGGCATGTGGAACTGGTATTTGACTCTAGAAAAGCACCGGAGTGCGTTCCTTAGGTTATACCCAGAAATGTCCGATCTTTCCAGAGAAAAACCACCCATTGCATCTCTAATCTTAAGGGTTGTTAATTTTTATGGAGATCGCAAGACCTTGACATATTCAGAAATAAAAGACAGATTGATCAAACCCAACGAAGAATTCGCTTGGCAAGTTGAGGTCCCACAAACTGGAAAATTCATTATTGACATTGAGTTCCTGGATTTAAAGACTGCATCCCCCAAGGATGAACCTTGCTCCATCTGGGATGATCAAATCATGCAGAAAGCCTCAGATGAAACAGCCCTTCATTCACTTGGTCTGATGCTAGAAGAAAACATCCATACAGACATCATGATCAATGTTGCAGATGGAAGCATCCAGGCCCATCGTGCTGTGCTTGCCGCACGATCACCTGTCTTCAAAAGCATGTTCTCATATAATCTTAAGGAGAAAGAGTCATCTGCCATAGACATGCCAGACATGTCAGTTGAAGCTTGCCAAGCTTTTCTCAGTTATATTTATGGGAGCATCAAGCATGAAGAATTTCTGGCACATCGGCTAGTCCTTCTGCATGCAGCTGATAAGTATGACATTCCTGACTTGAAAGAGGCATGCCAGCAGAGTCTTCTCAAAGATATTGATTCAAAAAATGTACTTGAGAGACTCCAAAATGCATGTTTACATGAATTGCCAGAATTGAAGAAGAACTGCTTGCAATATCTTGTGAAATTTGGTAAATTATATGACATTCGGGATGATTTCCAAGAATTCGTGCAATATGCCGACAGAGATCTGATTGCTGAAATATTCAATGAAATGATCATTTCCTGGAAAGGATTCTGA 984 0.4146 MGDSTCRVETTSRLAQWRIDNSATCTYRKSDPFKIGMWNWYLTLEKHRSAFLRLYPEMSDLSREKPPIASLILRVVNFYGDRKTLTYSEIKDRLIKPNEEFAWQVEVPQTGKFIIDIEFLDLKTASPKDEPCSIWDDQIMQKASDETALHSLGLMLEENIHTDIMINVADGSIQAHRAVLAARSPVFKSMFSYNLKEKESSAIDMPDMSVEACQAFLSYIYGSIKHEEFLAHRLVLLHAADKYDIPDLKEACQQSLLKDIDSKNVLERLQNACLHELPELKKNCLQYLVKFGKLYDIRDDFQEFVQYADRDLIAEIFNEMIISWKGF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01813 327 SUPERFAMILY POZ domain 147 258 IPR011333 -
Accr3g01813 327 ProSiteProfiles BTB domain profile. 162 221 IPR000210 GO:0005515
Accr3g01813 327 SMART BTB_4 162 260 IPR000210 GO:0005515
Accr3g01813 327 PANTHER OS08G0495500 PROTEIN-RELATED 5 326 IPR044714 -
Accr3g01813 327 CDD BTB_POZ_ZBTB_KLHL-like 161 243 - -
Accr3g01813 327 Gene3D Potassium Channel Kv1.1; Chain A 135 290 IPR011333 -
Accr3g01813 327 Pfam BTB/POZ domain 156 258 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01813 Accr-Chr3 24272062 24274322 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Accr3g01813 BTB 1.7e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01813 K10523 - qsa:O6P43_013451 476.092