Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01774 ATGTCTCTTTCGTCAAAGGGTTGGAAGTATGGAGTTCTTTTCAGCCTGTGGTTCTTCTGCTTTTCGCTACTGGTTGCTGCGCAGAATTTTATTACTGATCCCACTGAAGTTGATGCATTGAAAACCATCAAGCAAAGTCTGGTTGATCCTAATAGGAATCTGAGGAAGTGGGATGGTGGAGGAGATCCATGTAGATCTAACTGGACAGGGGTTGTATGCTATAATACGACACTAACTGATGGTTATCTCCACGTTAAAGAGTTGCAACTACTGCAAATGAATTTAAATGGAACTTTGGCAATGGAGATCGGCCGCTTGGCTTATGTGAAAATATTGAGCTTTATGTGGAACAATATAAGTGGGAGCATCCCTAAGGAAATTGGCAATATCAAGACTTTGGAGCTCTTACTCTTGAATGGAAACCATTTAACAGGTTCTCTGCCCGAAGAGCTTGGTGATCTTCCGAACTTAAACAGAATACAAATTGATCAGAACAAAATATCAGGACCTTTACCTGCATCATTTGCAAACCTGAACAAGACAAAGCACTTTCACATGAACAACAATTCAATCAGTGGACAAATCCCACCAGAGCTCTCCCGCTTGCCAAGTCTTGTTCACCTTCTTCTTGACAATAACAACTTATCAGGATATCTTCCTCCTGAGCTCTCCCAGTTGCCCAACATAAACATCATTCAACTTGATAACAATAACTTCAGTGGGAAAACCATTCCAACGTCTTATGCCAACATGTCAAAATTGTTGAAATTGAGTCTTAGGAACTGCAGCTTGCAAGGACCAGTTCCTGATTTAAGTACGATACCGCAACTTGGTTATCTTGACCTGAGTTACAATGAGTTGACTGGACCGATTCCTCGCAATAAGCTTGCTGACAATGTTACAACAATCGATTTATCGAACAACAAGCTTTCTGGAACCATTCCACCCTATTTTTCTCGTCTTCCTCTTCTTCAGAGATTGTCAATTGCAAACAATTCTTTGAATGGCAGTGTTCCTTCGACCATTTGGCAGAGCAGGACTTTAAATTCAACGGAAAGTTTTGTCATGGAATTTCAAGATAATAGTTTTTCTAGCATATCAGGCAGCACTAGCCTTCCTCCAAATGTCTCACTCTGGCTTGAGGGAAACCCTCTTTGTTCAAATGCTAGCCTGGCTCAGTTCTGTGGATTAGAAACCAATAACACTGATGCTATGGTTTCCACAAACTTCAATGGTAGCTGTCCTATTGCAGCATGTCCTCCTCCTTATGAATATGCTCCATCACCTCTAGTGAGCTGTTTCTGTGCTGCCCCTTTGATTGTTCAGTATCGGCTGAAAAGTCCAGGAATTTCAGCTTTTCCTTTTTATATCGATATGTTTGACAACTATCTGTCAAGTGGACTTGACATATTCATGTATCAACTATACATTGATACGTATTTTTGGGAAGAAGGGCCACGTCTGACAATGCGCTTGAAGCTTTTTCCTGTCTATGACGTTCAGAACCAAACCCAACATATTTTCAACAGAAGCGAGCTTGTAAGGCTAACGAGCCAGTTCACAGGATGGTTAATTCCTGACAGCGATATATTTGGGCCTTATGAACTACTTGGCTTCGATCTCCTGGATCCTTACAAGGATTTGATAGAAGCCTCTAAAAAAAGTTCAGGTATAAGCACGGGTGCACTGATTGGCATAATAATAGGGACAATTGCCTGTGCTGTTATAGCATCTGTAATTGTCAGTCTTCTTGTATTCAGAGTGCTCACGAGAGGCCGGCGTTCAATATCAAAACGACATCAAACTTCAAGGATTTCCATAAAAATTGATGGTGTGAGGGCCTTTACATATGAAGAAATGGCACAGGCTACAAACAACTTTAGCAACACAGCACAAATTGGCCGAGGGGGTTATGGGAAAGTTTATAAAGGGATTCTTGTTGATGGCACTGTGGTTGCCATAAAGCGTGCACAGGAGGGATCCCTGCAAGGTGAGAGGGAGTTCCTGACAGAAATACAATTATTATCCAGGGTACATCATCGTAACCTCGTGTCTTTGATTGGATACTGTGATGAAGAAGGTGAACAGATGCTGGTTTATGAATTTATGTCAAATGGCACACTTAGGGATCACCTTTCTGCTACTTCAAAAGAATCTCCAAGTTTTGCTATGAGATTAAGGATTGCACTAGGGTCAGCCAAAGGTATTCTGTATCTACATACAGAAGCGGATCCACCAATATTCCACCGAGATGTCAAGGCTAGCAACATACTATTGGATTCAAGGTTCAATGCAAAAGTTGCTGATTTTGGACTATCACGACTTGCCCCTGTTCCAGACATTGAAGGAGTTGTGCCAGCTCATGTATCTACAGTGGTAAAGGGGACCCCGGGTTACCTTGATCCAGAGTACTTTTTAACTCATAAGTTGACTGACAAGAGTGATGTTTACAGTCTTGGTGTTGTATTTCTGGAACTATTGACTGGGATGCAACCAATCTCGCATGGCAAAAATATTGTTAGAGAGGTTAATATTGCATATCAAACTGGGTTGACAGTCTCTGTTGTTGATGAACGCATGGGGTCTTACTCTTCAGAGTGCGTTGAGAAGTTCTTGGCTCTGTCCTTAAAGTGTTGCCAGGATGAGCCAGATGCGCGGCCTAACATGGCGGAAGTGGTTCGGGAGCTCGAAAACATATGGTCTATGATGCCAGAGTCTGATACCAAGAGACCTGAATCTATAACTCCTAGTAGTGATTCTGGAAAATTGGTCAGTTCATCTTCATCTTCTGCTGTAAAAACTCCCTATGTATCAGGAGATGTTTCAGGTAGTGACCTTATCAGTGGGGTGGCACCGACCATCGCGCCAAGATAG 2874 0.4217 MSLSSKGWKYGVLFSLWFFCFSLLVAAQNFITDPTEVDALKTIKQSLVDPNRNLRKWDGGGDPCRSNWTGVVCYNTTLTDGYLHVKELQLLQMNLNGTLAMEIGRLAYVKILSFMWNNISGSIPKEIGNIKTLELLLLNGNHLTGSLPEELGDLPNLNRIQIDQNKISGPLPASFANLNKTKHFHMNNNSISGQIPPELSRLPSLVHLLLDNNNLSGYLPPELSQLPNINIIQLDNNNFSGKTIPTSYANMSKLLKLSLRNCSLQGPVPDLSTIPQLGYLDLSYNELTGPIPRNKLADNVTTIDLSNNKLSGTIPPYFSRLPLLQRLSIANNSLNGSVPSTIWQSRTLNSTESFVMEFQDNSFSSISGSTSLPPNVSLWLEGNPLCSNASLAQFCGLETNNTDAMVSTNFNGSCPIAACPPPYEYAPSPLVSCFCAAPLIVQYRLKSPGISAFPFYIDMFDNYLSSGLDIFMYQLYIDTYFWEEGPRLTMRLKLFPVYDVQNQTQHIFNRSELVRLTSQFTGWLIPDSDIFGPYELLGFDLLDPYKDLIEASKKSSGISTGALIGIIIGTIACAVIASVIVSLLVFRVLTRGRRSISKRHQTSRISIKIDGVRAFTYEEMAQATNNFSNTAQIGRGGYGKVYKGILVDGTVVAIKRAQEGSLQGEREFLTEIQLLSRVHHRNLVSLIGYCDEEGEQMLVYEFMSNGTLRDHLSATSKESPSFAMRLRIALGSAKGILYLHTEADPPIFHRDVKASNILLDSRFNAKVADFGLSRLAPVPDIEGVVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQTGLTVSVVDERMGSYSSECVEKFLALSLKCCQDEPDARPNMAEVVRELENIWSMMPESDTKRPESITPSSDSGKLVSSSSSSAVKTPYVSGDVSGSDLISGVAPTIAPR 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01774 957 ProSiteProfiles Protein kinase domain profile. 627 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01774 957 FunFam Leucine-rich repeat protein kinase family protein 591 702 - -
Accr3g01774 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 747 759 IPR008271 GO:0004672|GO:0006468
Accr3g01774 957 SUPERFAMILY Protein kinase-like (PK-like) 601 897 IPR011009 -
Accr3g01774 957 Gene3D Phosphorylase Kinase; domain 1 597 702 - -
Accr3g01774 957 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 194 296 - -
Accr3g01774 957 MobiDBLite consensus disorder prediction 908 937 - -
Accr3g01774 957 Gene3D Ribonuclease Inhibitor 34 189 IPR032675 -
Accr3g01774 957 ProSitePatterns Protein kinases ATP-binding region signature. 633 655 IPR017441 GO:0005524
Accr3g01774 957 Pfam Protein kinase domain 628 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01774 957 Gene3D Ribonuclease Inhibitor 297 389 IPR032675 -
Accr3g01774 957 PANTHER RECEPTOR-LIKE PROTEIN 55 43 900 - -
Accr3g01774 957 SMART serkin_6 627 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01774 957 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 703 913 - -
Accr3g01774 957 SUPERFAMILY L domain-like 64 401 - -
Accr3g01774 957 MobiDBLite consensus disorder prediction 902 957 - -
Accr3g01774 957 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Accr3g01774 957 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 34 193 - -
Accr3g01774 957 Pfam Leucine rich repeat 155 215 IPR001611 GO:0005515
Accr3g01774 957 Gene3D Transferase(Phosphotransferase) domain 1 703 917 - -
Accr3g01774 957 Gene3D Ribonuclease Inhibitor 190 296 IPR032675 -
Accr3g01774 957 CDD STKc_IRAK 633 899 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01774 Accr-Chr3 23521908 23532656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01774 13 909 Receptor kinase-like Gene Family AT5G01950 58.499 0.0 1023
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Accr3g01774 Pkinase 7.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01774 - - qsa:O6P43_014171 1343.56