Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr3g01754 | ATGCTTGCTGCTGCTTCTTTTACTTCCAAGCGCATTCGAGCTTCGGAGTTTCTTCAACGTGGTGGCAGGCCCGGGATGGTATCGCGGGGTGCCACTGCTACAAGTTATTTTGAAAATTCTGCTTTTGTTGATTGGAGCAGGAAGGGTGGGATTAGCAATCGTGTTCGGTCGATTGCTAGTCTCTCTGGCATCAGCACATTCCCTAGTCGTAGTAGGATTAGTAGAGATTGCTTTAGGGTCAATCCAACTGCTCCCAGAAGATCTACAAGTTTACTTCTTTGTATAAAGGGGTTTCTCTCTGATTCATCACCTTCTAATTCCTATTCTTCGTTATATGGCAGAGTAACCAGACCATGCTTTCCACAACCTGGTTCAACGGTAGACGGGCGAGCATTTTTCTCAACTTCATCTAAAACGGATGATGGTACGTCCTCAAAGAAGATCGAGACCCAGAACCAAAAAACTCCTAACACGACTGCTAAAGCTTCTCCTGGGGAACAAGTTGCTGACATTAAAATTCTCCGTACACTTGCGAGTTACTTGTGGATGAAGGATAATCTTGAATTTCGATTCCGGGTTATTGCTTCTTTGGGTTTTCTTGTTGGTGCTAAGGTTCTGAATGTTCAGGTCCCTTTCTTATTCAAGCTTGCAGTTGACTGGTTGACGACTGCTACAGGCAATGCTGGTGATCTAGCTTCATTTGCAGCTGCAAATTCAACTCTGTTAACTCTTTTCGCAACTCCAGCATCTGTGTTAATCGGATATGGAATTGCTCGTTCAGGAGCTTCTGCTTTCAATGAACTGCGTACTGCTGTATTCTCTAAGGTGGCATTGCGAACGATTCGATTGGTATCTAGAAAGGTGTTCTTACATTTGCATGAACTTGACCTACGCTATCATCTAAGTCGAGAAACCGGCGCATTAAATAGAATAATTGATCGTGGTAGCCGTGCCATAAATTTTATACTCTCATCTATGGTGTTCAACGTAGTACCCACTGTATTAGAGATATCTATGGTATCAGGTATACTGGCTTACAAATTTGGAGCACCTTTTGCATGGATCACATCCTTATCAGTTGCTGCTTATGTTTTTTTTACGCTGACTGTGACACAGTGGAGGACTAAATTCAGGAAGATCATGAATAAAGCTGATAATGATGCAAGTACCAGGGCAGTTGATTCACTCATTAATTATGAGACTGTCAAATATTTCAATAATGAAGATTATGAAGGTGAAAAATATGATGAATACCTAAAGAGGTATGAAGATGCTGCTCTGAAAACACAACGCAGTCTTGCTTCTCTGAACTTTGGTCAAAATGTTATATTTAGCACTGCACTTTCTACAGCAATGGTGTTGTCTTCTCATGGGATTATGAGTGGCCAGATGACTGTTGGTGATTTGGTGATGGTGAATGGGCTCCTCTTCCAACTTTCTCTTCCGCTTAATTTCCTTGGCAGTGTATATCGTGAGACTATACAGAGTTTAGTTGACATGAAGTCAATGTTTCAGTTGCTTGAGGAAAGAGCTGATGTTAGGGATAAAGACAATGCAAAGCCCCTGGTATTAAATGGAGGGAGCATAGAGTTCGAAAATGTACACTTCAGTTACCTTGCTGAGAGAAAAATACTGGATGGTATATCTCTTGTTGTGCCAGCTGGAAAAAGCGTGGCAATTGTTGGAACTAGTGGAAGTGGTAAATCAACCATTCTTAGATTGCTCTTCAGGTTTTTTGACCCTCATTCTGGAAGTATAAAGATAGATGGTCAAAATATTCAGGATGTAACCCTTCATAGTCTTCGGAAGTCTATTGGTGTTGTTCCACAAGATACTGTACTTTTCAATGATACAATATTTCACAACATCCATTATGGTCGACTTTCAGCCACTACAGAGGAAGTCTATAAAGCTGCTCAACAAGCAGCAATTCATGACACTATCATGAATTTTCCTGAAAAATATTCAACTATTGTGGGAGAGCGAGGGCTCAAGGTAAGCGGTGGTGAGAAGCAACGTGTTGCGTTGGCTCGTGCATTTTTGAAAGCACCACCAATTCTGTTGTGTGATGAAGCTACGAGTGCACTTGACAGCACAACAGAAGCAGAGATATTAAATGCTTTGAAATCTTTAGCAAATAATCGCACTTCCATATTCATTGCTCACAGGCTTACTACTGCAATGCAGTGTGATGAGATCATAGTGTTGGAAAATGGGAAGGTGGTTGAACAAGGACCACATGAACTGCTCTTATCTAAGGCAGGAAGATATGCACAACTTTGGGCCCAGCAAAACAACACAATTGATGCAGCCATGAAAGTTGGGGCATAA | 2331 | 0.4157 | MLAAASFTSKRIRASEFLQRGGRPGMVSRGATATSYFENSAFVDWSRKGGISNRVRSIASLSGISTFPSRSRISRDCFRVNPTAPRRSTSLLLCIKGFLSDSSPSNSYSSLYGRVTRPCFPQPGSTVDGRAFFSTSSKTDDGTSSKKIETQNQKTPNTTAKASPGEQVADIKILRTLASYLWMKDNLEFRFRVIASLGFLVGAKVLNVQVPFLFKLAVDWLTTATGNAGDLASFAAANSTLLTLFATPASVLIGYGIARSGASAFNELRTAVFSKVALRTIRLVSRKVFLHLHELDLRYHLSRETGALNRIIDRGSRAINFILSSMVFNVVPTVLEISMVSGILAYKFGAPFAWITSLSVAAYVFFTLTVTQWRTKFRKIMNKADNDASTRAVDSLINYETVKYFNNEDYEGEKYDEYLKRYEDAALKTQRSLASLNFGQNVIFSTALSTAMVLSSHGIMSGQMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKSMFQLLEERADVRDKDNAKPLVLNGGSIEFENVHFSYLAERKILDGISLVVPAGKSVAIVGTSGSGKSTILRLLFRFFDPHSGSIKIDGQNIQDVTLHSLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATTEEVYKAAQQAAIHDTIMNFPEKYSTIVGERGLKVSGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVVEQGPHELLLSKAGRYAQLWAQQNNTIDAAMKVGA | 776 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr3g01754 | 776 | FunFam | ATP-binding cassette sub-family B member 7 | 165 | 517 | - | - | |
Accr3g01754 | 776 | ProSitePatterns | ABC transporters family signature. | 666 | 680 | IPR017871 | GO:0005524|GO:0016887 | |
Accr3g01754 | 776 | Gene3D | ABC transporter type 1, transmembrane domain | 180 | 519 | IPR036640 | GO:0005524|GO:0016020 | |
Accr3g01754 | 776 | MobiDBLite | consensus disorder prediction | 148 | 163 | - | - | |
Accr3g01754 | 776 | Pfam | ABC transporter | 545 | 694 | IPR003439 | GO:0005524 | |
Accr3g01754 | 776 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 194 | 495 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Accr3g01754 | 776 | CDD | ABC_6TM_ATM1_ABCB7 | 196 | 503 | - | - | |
Accr3g01754 | 776 | Pfam | ABC transporter transmembrane region | 194 | 482 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Accr3g01754 | 776 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 518 | 764 | IPR027417 | - | |
Accr3g01754 | 776 | SUPERFAMILY | ABC transporter transmembrane region | 188 | 508 | IPR036640 | GO:0005524|GO:0016020 | |
Accr3g01754 | 776 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 175 | 760 | IPR039421 | - | |
Accr3g01754 | 776 | MobiDBLite | consensus disorder prediction | 126 | 163 | - | - | |
Accr3g01754 | 776 | SMART | AAA_5 | 554 | 740 | IPR003593 | GO:0016887 | |
Accr3g01754 | 776 | Gene3D | - | 520 | 773 | IPR027417 | - | |
Accr3g01754 | 776 | FunFam | ABC transporter B family member 25 | 521 | 774 | - | - | |
Accr3g01754 | 776 | CDD | ABCC_ATM1_transporter | 529 | 764 | - | - | |
Accr3g01754 | 776 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 529 | 763 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr3g01754 | Accr-Chr3 | 22852095 | 22863112 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr3g01754 | 367 | 772 | Calmodulin-binding Proteins | AT2G36910 | 35.492 | 1.47e-62 | 226 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr3g01754 | K05662 | - | gmx:100787870 | 1090.49 |