Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01718 ATGGCCGAAGTCATTCCTCAGCCGCCAATTCAAGATCTCTCCGAGCCAGTCATTGACGTCAAACTCTTCAACCGATGGACCTTTGACGATGTTCAGGTAAACGACATATCCTTGGCTGATTACATTGGTGTGGCTCCTGCCAAGCATGCAACCTATGTGCCTCACACTGCTGGGAGGTATTCAGTCAAGCGTTTCAGGAAGGCACAGTGTCCAATTGTTGAGAGGCTTACCAATTCTCTGATGATGCATGGAAGAAACAATGGGAAAAAGCTAATGGCAGTAAGGATTATTAGGCACGCAATGGAAATTATCCATTTGCTCACTGATCAAAATCCCGTTCAAGTTATTGTTGATGCTGTGATCAACAGTGGACCTAGAGAAGATGCTACACGTATTGGATCTGCTGGTGTTGTAAGACGTCAAGCTGTGGATATTTCTCCTCTCCGACGTGTGAATCAGGCAATTTACCTCCTCACTACAGGAGCCCGTGAGTCTGCATTCAGGAACATTAAGACGATTGCAGAATGCTTGGCTGATGAACTTATCAATGCTGCTAAGGGATCTTCAAACAGCTATGCCATCAAGAAGAAGGATGAGATCGAAAGAGTTGCCAAGGCCAACCGTTAA 627 0.4561 MAEVIPQPPIQDLSEPVIDVKLFNRWTFDDVQVNDISLADYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIRHAMEIIHLLTDQNPVQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01718 208 Pfam Ribosomal protein S7p/S5e 62 208 IPR023798 -
Accr3g01718 208 SUPERFAMILY Ribosomal protein S7 21 208 IPR036823 -
Accr3g01718 208 FunFam 40S ribosomal protein S5 5 208 - -
Accr3g01718 208 CDD uS7_Eukaryote 21 208 IPR005716 GO:0003735|GO:0006412|GO:0015935
Accr3g01718 208 ProSitePatterns Ribosomal protein S7 signature. 74 100 IPR020606 GO:0003723|GO:0003735|GO:0006412
Accr3g01718 208 PANTHER RIBOSOMAL PROTEIN S7 7 208 IPR000235 GO:0006412
Accr3g01718 208 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 2 208 IPR000235 GO:0006412
Accr3g01718 208 Gene3D Ribosomal protein S7 domain 6 208 IPR036823 -
Accr3g01718 208 NCBIfam 30S ribosomal protein S7 20 208 IPR005716 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01718 Accr-Chr3 22183428 22185008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01718 19 208 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 90.526 1.57e-132 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01718 K02989 - mnt:21395650 375.17