Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01700 ATGCTTCAACCTCGTAATCTCCTTGTTCCCTTATTCATATTCTTCTCACTCGGGATCCTTAACGGTGTCGTTTCGGAACCACAGACCCATCTTCTTAGTAGTGAGTGTAACGCATACTTGATTTCCAACGTATTCCAGGACTCCAACGTCACCATCTTCAATCAAAACCTAAACGCAACGTTGCAAGACATCAAAGAGCAGATCAGTACTGTCCAGAATAAGCACTTCGTCACCTCACAGCAAAGCAATGGAGGAAACCCTATTGCCACGCTTTTTCAATGCAGAAACTACCTCTCCGTCGCCGACTGTGTGGCCTGCCTCAACGCGGCTGCTGAGCCAATCCGGCAATGCCCCGCGGGGACCTCCGGTGCCCATGTTGTCTACGACGGGTGCTTCCTAAGGTTCGATATTAGCAGTAGTTTCTTTGAAGAGACGACGCAAGGTTTCAACATCACATCATGTGGGAATCAGACTATAGGAGAAGCCATTACATTTACCTCAGAAGCACAACAAATGCTAATGAATCTCCAAAGAGCAACACCCACAATCACTGGCTTCTCTGTAGCTACAAAGACGCAAGTGCCTAATAATGGTCCACTTATTTATGGATTTGCTCAATGTATTGAAACTATCTCACAGAGTCAGTGTGAGGATTGCCTGAATTCTCAGTACAATAATATGCAGACTTGTCTTTCCAGTTCAGATGGTAGGGCTTCTTCTAATGGTTGTTTCTTGAGATTCTCAACCTCTTCCTTCTTTCCTGATAACCAGACCATCCCCATCACACCCTGGAAAAAACAAGCTTCAAGCAATAAGGGAATCATTATTGGTGGAGTAGTTGTCGGTGTATCTCTGGCTTTGATCCTTATTGCATTATTTGCCTTCATTATTATTAGGCGAAGAAAAAACGCTAAGATGATCAGTGTTCCTAGAGGAGATATACCAGGAGCAAGCAAGCTAAAAGGTCCAGTTACTTTTAGTTACAATATTTTGAAGACCGCAACCAAGAATTTTAGTAAAGAAAATAAAATAGGAGAAGGTGGATTTGGAGCTGTATATAAGGGCACTTTGTCGAATGGAAAAGTAGTTGCAATCAAGAAATTAACTTTGCACCACTTCAACAAGATAGATGAAGAATTTGAAAGCGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTTGTTCGACTCCTGGGATGTTGTAGTAAAGGCCATAACAGAATCCTTGTTTACGAATACATGAAGAACAAGAGTCTTGACATATACTTATACGGTGAAAAGAAGGGATATCTCAATTGGAAACAACGATATGAAGTCATTTTAGGAATAGCAAGGGGTTTGGCTTATCTACATGAAGAATTCCATGTTCGCATTATACATAGAGATATAAAGACTCAAAATATTCTCTTAGATGACGATCTACAACCTAGAATTGCTGATTTTGGGTTGGCCAGACTTATGCCTGAAGACAAAACTCATCTTAGTACAAGATTCGCAGGAACATTAGGATACACACCTCCAGAGTATGCAATTTACGGCCAATTATCAGAAAAAGTTGATATTTATAGCTATGGTGTTGTAGTGCTAGAAATCATCAGTGGTGAGAATTGCAATAACTTAGAGGTTGATGGTGACGATGAAGGCGGATACCTCCTCCAAAGAGCTTGGAATCTATATGAGAGAGGCATGCACTTAGAGTTGGTGGACAATGCCTTGAACCCTAATGATTATGATGCAGATGAAGTTAAGAAAGTCATAGAGATTGCTTTGCTTTGCACCCAACCATCTGCAGAAACAAGGCCAACGATGTCTGAAATAATGGTTTTGCTCCAAAAGAAGGGTTTATTGGAGAGTATGAGGCCAACTATGCCTATGTTCATTGAAATTACTTAG 1896 0.4098 MLQPRNLLVPLFIFFSLGILNGVVSEPQTHLLSSECNAYLISNVFQDSNVTIFNQNLNATLQDIKEQISTVQNKHFVTSQQSNGGNPIATLFQCRNYLSVADCVACLNAAAEPIRQCPAGTSGAHVVYDGCFLRFDISSSFFEETTQGFNITSCGNQTIGEAITFTSEAQQMLMNLQRATPTITGFSVATKTQVPNNGPLIYGFAQCIETISQSQCEDCLNSQYNNMQTCLSSSDGRASSNGCFLRFSTSSFFPDNQTIPITPWKKQASSNKGIIIGGVVVGVSLALILIALFAFIIIRRRKNAKMISVPRGDIPGASKLKGPVTFSYNILKTATKNFSKENKIGEGGFGAVYKGTLSNGKVVAIKKLTLHHFNKIDEEFESEVKLISNVHHRNLVRLLGCCSKGHNRILVYEYMKNKSLDIYLYGEKKGYLNWKQRYEVILGIARGLAYLHEEFHVRIIHRDIKTQNILLDDDLQPRIADFGLARLMPEDKTHLSTRFAGTLGYTPPEYAIYGQLSEKVDIYSYGVVVLEIISGENCNNLEVDGDDEGGYLLQRAWNLYERGMHLELVDNALNPNDYDADEVKKVIEIALLCTQPSAETRPTMSEIMVLLQKKGLLESMRPTMPMFIEIT 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01700 631 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Accr3g01700 631 Gene3D Transferase(Phosphotransferase) domain 1 415 620 - -
Accr3g01700 631 CDD STKc_IRAK 344 613 - -
Accr3g01700 631 FunFam Cysteine-rich receptor-like protein kinase 2 415 619 - -
Accr3g01700 631 SMART serkin_6 338 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01700 631 FunFam Cysteine-rich receptor-like protein kinase 2 302 414 - -
Accr3g01700 631 Gene3D Phosphorylase Kinase; domain 1 314 414 - -
Accr3g01700 631 ProSiteProfiles Protein kinase domain profile. 338 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01700 631 Coils Coil 54 74 - -
Accr3g01700 631 Gene3D - 147 252 IPR038408 -
Accr3g01700 631 Gene3D - 31 139 IPR038408 -
Accr3g01700 631 SUPERFAMILY Protein kinase-like (PK-like) 320 611 IPR011009 -
Accr3g01700 631 Pfam Protein kinase domain 338 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01700 631 ProSiteProfiles Gnk2-homologous domain profile. 147 252 IPR002902 -
Accr3g01700 631 Pfam Salt stress response/antifungal 49 136 IPR002902 -
Accr3g01700 631 Pfam Salt stress response/antifungal 157 249 IPR002902 -
Accr3g01700 631 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 91 629 - -
Accr3g01700 631 ProSiteProfiles Gnk2-homologous domain profile. 35 140 IPR002902 -
Accr3g01700 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Accr3g01700 631 FunFam Cysteine-rich receptor-like protein kinase 2 149 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01700 Accr-Chr3 21868136 21872693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01700 7 629 Receptor kinase-like Gene Family AT1G70520 35.285 4.32e-112 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr3g01700 Pkinase 5.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01700 - - gmx:100813585 732.635