LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr3g01693	ATGCTTCTGCATCCTAATCTCCTTACCTTATTCATTTTCATATTCCAGTCATGCTGGATTATTAACGGCGTCGTTTCGAACCCACAGACAAATCTTCTAAAGATAGGGTGCAGCACACCCAACCAGTTCGTGGTGTCCAACTACACCATCTTCAACCAAAATCTAAACTTAACGTTGCAAGAAATAAGAGAGCAAATCAGTGACCCAAAGAGGCACTTCGCCACTGCACGAGAAGGCAATGGGGGAAACCCTATTTCCACTCTCTTTCAATGCAGAAATTATCTTTCCGTTGCTGATTGTGTCAGCTGCTTAGACGTCGCCGCCGCACAAATCCACTACTGCTCAGCCGGGTCCTACGGTGGCCATGTCGTCTATGATGGCTGCTTCCTCAGGTACGAGGCTGGTGATTTCTATGGCGAGACGATAGGGACTTTGACTAAAGTATTGTGTGGAGTTCAAAAAGCCAGAGAAGCCATGGAATTCACAGAGTCTGCCAAAAAGTTGCTAATGAATCTCTTAACGGCAACACCCACTATTCCTGGTTTCTCTGCAGCCACAAAGATACAAGTGGCTAGTAATGGTGAAACTATTTATGCTTTTGCTCAATGTGTTGGTACTGTCACACAAAGTGGATGTCTAGATTGCTTAAAGGCTGTGGATAGCAATATGCAGAATTGTCTTCCCAATTCAGAAGGTAAAGCTTTTGATGCTGGGTGTTTCATGAGATACTCCACCACTTCCTTCTTTCCTGATAACCAGACCATTGATATCATACCCTTGGTCAAACCAGGCTCATCAAGAAAGAAGGGGATAATTATTGGCGGAGTTGTTGGAGTTCTATCACTTGTTTTGATTCTTCTTGCATTATTTTCTTGGACTAGACGACCAAAAAGCCCCAAGAGAGTTCCTACAGGTGATATAACTGAAACAAGTAAGCTGAAAGGCCCAATGACTTATAGTTATCGGGATTTGAAGTCCGCAACCAAAAATTTCAGTCATGAAAATAAACTAGGAGAAGGAGGATTTGGTATTGTATACAAGGGCACTCTAAGGAACGGAAAAGTAGTTGCAGTTAAGAAATTAACTTGTCAACACTTGAGCAGGATAGACGAAGAGTTTGAAGGTGAAGTGAAGCTTATAAATAATATTCATCATAGAAATCTTGTTCGACTTCTCGGATGTTGCAGTAAAGGCCATGACAGATTCCTTGTTTATGAATACATGAAAAACAATAGTCTCGACAAGTTCTTATTTGGTAAAAAGAAAGGCTCTCTTGACTGGAAGCAGCGATTTGATATAATTTTAGGAACAGCAAAGGGATTAGCTTATCTACATGAAGAATTTCATATTCGTATCATACATAGAGATATAAAGACCAACAACATCCTTCTAGATAATAATATGCACCCTAGAATTGCTGACTTTGGACTCGCAAGACGTTTACCAGAAAACAAATCCCACCTGACCACAAATTTTGCAGGAACATTAGGTTATACAGCTCCTGAATATATAATTCATGGCCAATTATCAGAGAAAGTTGATATATACAGCTATGGTGTTGTAGTTTTGGAAATTATTAGCGGTAGAAAATGTAAAGAACTAGGGGTTGATGATGATGATGAAGGGGAATTTCTCCTTCAAAATGCGTGGAAACTATACGAGAGAGGCTTGCATATAGAGTTGGTGGACAACATCCTAGACCCTACTGACTATGATGAAGAGGAAGTGAAGAAAATCATAGAGATAGGTTTGCTTTGCACGCAGGCATCTCCTGCAATAAGGCCAATAATGTCTGAGGTTGTTGTTTTGCTGCAAAACAAGGGCTTATTAGAGAACTTAAGACCAACAATGCCCATCTTGGTTGACACTAACTAA	1875	0.4053	MLLHPNLLTLFIFIFQSCWIINGVVSNPQTNLLKIGCSTPNQFVVSNYTIFNQNLNLTLQEIREQISDPKRHFATAREGNGGNPISTLFQCRNYLSVADCVSCLDVAAAQIHYCSAGSYGGHVVYDGCFLRYEAGDFYGETIGTLTKVLCGVQKAREAMEFTESAKKLLMNLLTATPTIPGFSAATKIQVASNGETIYAFAQCVGTVTQSGCLDCLKAVDSNMQNCLPNSEGKAFDAGCFMRYSTTSFFPDNQTIDIIPLVKPGSSRKKGIIIGGVVGVLSLVLILLALFSWTRRPKSPKRVPTGDITETSKLKGPMTYSYRDLKSATKNFSHENKLGEGGFGIVYKGTLRNGKVVAVKKLTCQHLSRIDEEFEGEVKLINNIHHRNLVRLLGCCSKGHDRFLVYEYMKNNSLDKFLFGKKKGSLDWKQRFDIILGTAKGLAYLHEEFHIRIIHRDIKTNNILLDNNMHPRIADFGLARRLPENKSHLTTNFAGTLGYTAPEYIIHGQLSEKVDIYSYGVVVLEIISGRKCKELGVDDDDEGEFLLQNAWKLYERGLHIELVDNILDPTDYDEEEVKKIIEIGLLCTQASPAIRPIMSEVVVLLQNKGLLENLRPTMPILVDTN	624

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr3g01693	624	Pfam	Protein kinase domain	332	535	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr3g01693	624	Gene3D	-	143	248	IPR038408	-
	Accr3g01693	624	Gene3D	-	30	137	IPR038408	-
	Accr3g01693	624	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	452	464	IPR008271	GO:0004672\|GO:0006468
	Accr3g01693	624	FunFam	Cysteine-rich receptor-like protein kinase 2	297	407	-	-
	Accr3g01693	624	ProSiteProfiles	Gnk2-homologous domain profile.	31	137	IPR002902	-
	Accr3g01693	624	Gene3D	Transferase(Phosphotransferase) domain 1	408	612	-	-
	Accr3g01693	624	FunFam	Cysteine-rich receptor-like protein kinase 2	145	248	-	-
	Accr3g01693	624	CDD	STKc_IRAK	337	606	-	-
	Accr3g01693	624	SUPERFAMILY	Protein kinase-like (PK-like)	315	605	IPR011009	-
	Accr3g01693	624	Pfam	Salt stress response/antifungal	43	133	IPR002902	-
	Accr3g01693	624	Pfam	Salt stress response/antifungal	153	245	IPR002902	-
	Accr3g01693	624	ProSiteProfiles	Gnk2-homologous domain profile.	143	248	IPR002902	-
	Accr3g01693	624	Gene3D	Phosphorylase Kinase; domain 1	304	407	-	-
	Accr3g01693	624	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	89	620	-	-
	Accr3g01693	624	SMART	serkin_6	331	602	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr3g01693	624	ProSitePatterns	Protein kinases ATP-binding region signature.	337	360	IPR017441	GO:0005524
	Accr3g01693	624	ProSiteProfiles	Protein kinase domain profile.	331	609	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr3g01693	624	FunFam	Cysteine-rich receptor-like protein kinase 2	408	612	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr3g01693	Accr-Chr3	21467909	21472643	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr3g01693	7	622	Receptor kinase-like Gene Family	AT1G70520	37.102	6.28e-125	381

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Accr3g01693		Pkinase	2.7e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr3g01693	-		-	pcin:129300003	772.311