Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01682 ATGCTTCGACGTACCACTCTCCTTCCCTTGTTTACTACCTTCATATTCTGGTCATGCTCATCCCTTGACGGCGTCGTTTCCGACCCTCAGACCAATCATCTATGTCATGCCTGCCTCAAATCTAACGGAGATGAAATTGATACTAAGTCCTTCAATGACAGCCTAAGCGCAACGTTTCGTGATCTCACGTATCAGGTGGTGAACCAGAGCAAGTTCTTTGCCACGGCGCAGCAGACCGATGGAAGCCTCCCCGTTTACGCTATTTTTCAGTGCAGAAGTTACCTCTCTGCCCCTGACTGTGCCGCCTGCTTCACCCATGCCGCTTCACAAATCCGCAACTGCTCCGCCGGGACTAACTTGGCTCGTGTCATCTACGACGGCTGCTTCCTCAGGTATGAAAGTACCAATATTCTTGAGCAGACAGCTGGAATTTACAATGGTGCACCGTGTGGGAATCATAGTGCAGAAGCAGCTACTGCTTTTTCTTCAGCTGCTCAAAAACTCCTAACGAATCTTCAAACAACAACACCCAGAATCAATGGTTTCTCTGCAGCCACAGAAATTCAAGTTCCTAATAATAATAGTAATAATGGTGAAACCATCTATGGCTATGCTCAATGTACTGAAACTATCTCACAGAGTGGGTGTGAAGATTGCTTGAAGCAAGGGGTAAACTCTCTGCAGCCTTGTCTTCCTAATACAGAGGGTAGGGTTTTTGATGCTGGCTGTTTCATGAGATACTCTACCACTTCCTTTTTTCCTGACAACCAGATCATCAATATCACAAGTCCCTCAGTCAAACAAGGGGCTTCAAGCAAGAAGGGGTTGATTATTGGTGTGATTGTTGGAGGGGTGGTTTTTGTTTTGATCCTCCTTACTCTACTGGCTTATATCAAACGACCAAAAAGGCACAAGAGAGTTGCTGCAGGAGACATAACTGGAGCAAGCAATTTGAAGGGCCCAGTTACTTTTAATTATGGGCATTTAAAGTATGCAACTAAAAATTTCAGTGTAGAGAATAAAATTGGAGAAGGAGGATTTGGTATTGTATTTAAGGGCACTCTGAAGAATGGAAAAGTAGTTGCGGTCAAAAAATTAGCTTTACAACGCCATTCCAAGAGAGTGGAGGAAGAATTTGAGAGTGAAGTGAAGCTTTTAAATAATGTTCATCATCGAAATCTTGTTCGACTTCTTGGATGTTGCAGTAAAGGCGATGAGAGAATACTTATCTATGAATACATGGAAAACACCAGTTTGGACAGATTCTTATTTGGTAAAAAGAAGGGTTCTCTTAATTGGAAACATCGGTATGATATAATTGTAGGAACAGCACGTGGTTTGGCTTATCTGCATGAGGAATTTTATGTCCGTATTATACATAGAGATATAAAGACTAATAACATCCTCTTAGACGACGATCTACAACCTAGAATATCTGATTTTGGTTTGGCAAGACTCTTACCTGAAGAACAATCTCATCTCAGTACAAAAGTTGCAGGAACATTAGGATATACAGCTCCGGAATATGCAATTCATGGTCAATTATCAGAAAAGGCTGATATCTATAGCTTTGGTGTTGTTCTCCTAGAGATCATCAGTGGTCAGAGAAGCAATGAATTAAAAATTGATGGTGATCTTGAAGGCGAATTCCTCCTTCGAAAGGCTTGGAAACTATATGAAAGAGGCATCCACGATGAGCTGGTCGACGAAACCTTAAACCCTAATGATTATGATGCAGAGGAAGTGAAAAAAATAATAGAAGTCGGTTTCCTTTGCACCCAAGCACCTGCTGAATTAAGGCCACCAATGTCTGAAGTAGTTGTTTTGCTCCAAAACAAGGGCTTATCAAAGAACACAAAACCCACAATGCCTATTTTGATTGAAGTTAATTAA 1893 0.4163 MLRRTTLLPLFTTFIFWSCSSLDGVVSDPQTNHLCHACLKSNGDEIDTKSFNDSLSATFRDLTYQVVNQSKFFATAQQTDGSLPVYAIFQCRSYLSAPDCAACFTHAASQIRNCSAGTNLARVIYDGCFLRYESTNILEQTAGIYNGAPCGNHSAEAATAFSSAAQKLLTNLQTTTPRINGFSAATEIQVPNNNSNNGETIYGYAQCTETISQSGCEDCLKQGVNSLQPCLPNTEGRVFDAGCFMRYSTTSFFPDNQIINITSPSVKQGASSKKGLIIGVIVGGVVFVLILLTLLAYIKRPKRHKRVAAGDITGASNLKGPVTFNYGHLKYATKNFSVENKIGEGGFGIVFKGTLKNGKVVAVKKLALQRHSKRVEEEFESEVKLLNNVHHRNLVRLLGCCSKGDERILIYEYMENTSLDRFLFGKKKGSLNWKHRYDIIVGTARGLAYLHEEFYVRIIHRDIKTNNILLDDDLQPRISDFGLARLLPEEQSHLSTKVAGTLGYTAPEYAIHGQLSEKADIYSFGVVLLEIISGQRSNELKIDGDLEGEFLLRKAWKLYERGIHDELVDETLNPNDYDAEEVKKIIEVGFLCTQAPAELRPPMSEVVVLLQNKGLSKNTKPTMPILIEVN 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01682 630 ProSiteProfiles Protein kinase domain profile. 336 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01682 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Accr3g01682 630 Gene3D - 145 252 IPR038408 -
Accr3g01682 630 Gene3D - 30 136 IPR038408 -
Accr3g01682 630 Pfam Salt stress response/antifungal 43 134 IPR002902 -
Accr3g01682 630 Pfam Salt stress response/antifungal 154 249 IPR002902 -
Accr3g01682 630 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 86 626 - -
Accr3g01682 630 CDD STKc_IRAK 342 612 - -
Accr3g01682 630 SUPERFAMILY Protein kinase-like (PK-like) 319 610 IPR011009 -
Accr3g01682 630 ProSiteProfiles Gnk2-homologous domain profile. 143 252 IPR002902 -
Accr3g01682 630 SMART serkin_6 336 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01682 630 ProSitePatterns Protein kinases ATP-binding region signature. 342 365 IPR017441 GO:0005524
Accr3g01682 630 Gene3D Phosphorylase Kinase; domain 1 299 413 - -
Accr3g01682 630 Gene3D Transferase(Phosphotransferase) domain 1 414 623 - -
Accr3g01682 630 FunFam Cysteine-rich receptor-like protein kinase 2 301 413 - -
Accr3g01682 630 FunFam Cysteine-rich receptor-like protein kinase 2 146 252 - -
Accr3g01682 630 Pfam Protein kinase domain 337 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01682 630 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Accr3g01682 630 FunFam Cysteine-rich receptor-like protein kinase 2 414 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01682 Accr-Chr3 21162913 21167297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01682 7 613 Receptor kinase-like Gene Family AT1G70520 36.290 7.84e-119 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr3g01682 Pkinase 4.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01682 - - vra:106775622 748.814