Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01681 ATGCCTCAACCTATTACTCCTCTTCCCTTGTTTATTACTACCTGCTCCATAATCTGGTCATGTTGGTCCCTTAACAGCGTCGTTTCTGACCCCCAGATCAATCTTCTAAGCCGTGCTTGCCTCCAATATAACAGAGCTGAGTATGATACCAAGGCTTTCAATGACAGCGTAAGCGCAACGTTTCGTGACCTCACATATCAGGTGGTGAGCCAGAGCAGGATCTTCGCCACGGCGCAGCAGACCGACGGAGACCACCCGGTTTACGCTATTTTTCAGTGCAGAAGCTACCTCTCCGCCTCCGACTGTGCCGCTTGCTTCTCCCTTGCCGCCACAGAAATCCGCAACTGCTCCGCTGGGACTAACTTTGCCCGTATCATCTATGACGGCTGCTTCCTCAGGTATGAGAGCACCAATATTCTTGAGCAGACAACTGGAATTTACAATACTGCATCGTGTGGAAATCAAAGTACTGCAGAAGTAGACACATCATTTTCTTTAGCTGCACAACAACTGCTAATGAATATTGAAACAACAACACCCAAAATCTCTGGTTTCTCTGCCGCCACAAAAACTCAAAATGCTCCAACTATTATTTATGGCTATGCTCAATGTACTGAAACTATCTCACAGAGTGGGTGTGAGGATTGCTTGCAGCAAGGGGTCAACACTGTACAGACTTGTCTTCCTAATTCAGAGGGTAGGGCTTTTGACGCTGGTTGTTACATCAGATACTCCACAACTTCCTTCTTTCCTGATAACCAGACCATTTATATCCCTAATCCCTCAGTCAAACAAGCTGGTTCAAGCAAGAAGGGGGTCATTATTGGCGTACTTGTTGGAGTGGTAGCTTTTGCTTTGGTCCTCCTTACTCTACCGGCTTATATCAGACGACCAAAAAGGCATGAGAGAGTTCTAAGAGGAGACATAACTGGAGCAAGCACGTTGAAGGGCCCAGTTATTTATAGTTACGGAGATTTAAAGTCAGCAACAAAAAATTTCAGTATAGAAAATAAACTTGGAGAAGGAGGATTTGGTGTTGTATACAAGGGCACTTTGAAGAATGGAAAATCGGTTGCCGTCAAGAAATTAACTTTACGGCGTCACTCCGAGAGAGTGGAGGAAGAATTTGAGAGCGAAGTGAAGCTTATAAGTAATGTTCATCATCGAAATCTTGTTCGGCTTCTTGGATGTTGCAGTAAAGGCAATGAGAGAATACTTGTTTACGAATACATGAAAAACACAAGTTTGGACAGATTCTTATTTGGCAAAAAGAAGGGTTCTCTTGGTTGGAAGCAACGATATGATATAATTTTAGGAACGGCAAGGGGTTTAGCTTATCTACATGAAGAATATCATGTTCGTATCATACATAGAGATATAAAGACTAACAACATCCTTTTAGATGATGATTTGCAACCAAGAATTTCTGATTTTGGCTTGGCAAGGCTTTTTCCTGAGGAGAAAACTCATCTTAGTACAAAAGTTGCTGGAACATTAGGATACACAGCTCCAGAGTATGCAATTCATGGTCATTTATCAGAAAAGGCTGATATCTATAGTTTTGGTGTTGTTGTCCTAGAGATCATCAGTGGTGAACGAAGTAATGAATTAAAAGTTGATGGTGACGATGAAGGTGAATTCCTCCTTAGAAAGGCTTGGAAACTATATGAAAGAGCCATCCACGAGGAGCTGGTCGACGAAACCTTAAACCCTAATGATTATGATGCAGAGGGAGTGAAAAAAATAATAGAAATCGGTTTGCTTTGCACCCAAGCATATACCGAATTAAGGCCAACAATGTCTGAAGTAGTTGTTTTGCTCCAAGAGAAGGGCTTATCACAGAACATAAAACCCACAATGCCTATTTTGATTGAAGCTAATTAA 1884 0.4214 MPQPITPLPLFITTCSIIWSCWSLNSVVSDPQINLLSRACLQYNRAEYDTKAFNDSVSATFRDLTYQVVSQSRIFATAQQTDGDHPVYAIFQCRSYLSASDCAACFSLAATEIRNCSAGTNFARIIYDGCFLRYESTNILEQTTGIYNTASCGNQSTAEVDTSFSLAAQQLLMNIETTTPKISGFSAATKTQNAPTIIYGYAQCTETISQSGCEDCLQQGVNTVQTCLPNSEGRAFDAGCYIRYSTTSFFPDNQTIYIPNPSVKQAGSSKKGVIIGVLVGVVAFALVLLTLPAYIRRPKRHERVLRGDITGASTLKGPVIYSYGDLKSATKNFSIENKLGEGGFGVVYKGTLKNGKSVAVKKLTLRRHSERVEEEFESEVKLISNVHHRNLVRLLGCCSKGNERILVYEYMKNTSLDRFLFGKKKGSLGWKQRYDIILGTARGLAYLHEEYHVRIIHRDIKTNNILLDDDLQPRISDFGLARLFPEEKTHLSTKVAGTLGYTAPEYAIHGHLSEKADIYSFGVVVLEIISGERSNELKVDGDDEGEFLLRKAWKLYERAIHEELVDETLNPNDYDAEGVKKIIEIGLLCTQAYTELRPTMSEVVVLLQEKGLSQNIKPTMPILIEAN 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01681 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Accr3g01681 627 FunFam Cysteine-rich receptor-like protein kinase 2 299 410 - -
Accr3g01681 627 Pfam Protein kinase domain 334 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01681 627 CDD STKc_IRAK 339 609 - -
Accr3g01681 627 Gene3D Transferase(Phosphotransferase) domain 1 411 618 - -
Accr3g01681 627 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Accr3g01681 627 ProSiteProfiles Gnk2-homologous domain profile. 146 249 IPR002902 -
Accr3g01681 627 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 622 - -
Accr3g01681 627 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Accr3g01681 627 Gene3D Phosphorylase Kinase; domain 1 300 410 - -
Accr3g01681 627 Pfam Salt stress response/antifungal 46 136 IPR002902 -
Accr3g01681 627 Pfam Salt stress response/antifungal 152 246 IPR002902 -
Accr3g01681 627 FunFam Cysteine-rich receptor-like protein kinase 2 147 249 - -
Accr3g01681 627 SUPERFAMILY Protein kinase-like (PK-like) 314 607 IPR011009 -
Accr3g01681 627 SMART serkin_6 333 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01681 627 ProSiteProfiles Protein kinase domain profile. 333 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01681 627 FunFam Cysteine-rich receptor-like protein kinase 2 411 615 - -
Accr3g01681 627 Gene3D - 34 138 IPR038408 -
Accr3g01681 627 Gene3D - 145 249 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01681 Accr-Chr3 21130139 21140939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01681 3 610 Receptor kinase-like Gene Family AT1G70520 38.523 1.27e-125 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr3g01681 Pkinase 9.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01681 - - gmx:100813585 764.222