Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01680 ATGCTCTTGCTTCCACCTTCTATTACTCTCCTTATTCCCTTATTCACAACCTTCATATCCTTAAACGGCGTCGTCTCTGACCCACAGACCTATCTTCTCAACCCCGGCTGCTTCCAGTACACTAGATTAGATCCAGCAGATGCTAATTCCTTCAATCAAAGCTTAAACGAAGCATTTCAAGACCTCTCCAACCAGAACAAGCACTTCGCCACGGCCCAGCAAGCCACCGGAGCCCTTCCTGTTTTCGCTCTCTTTCAGTGCAGAAGCTACCTCTCCGCCGCCGACTGTGCCAACTGCTTCTCCGCCGCTGTCGCTCAAATCCGTAATTGCTCCGCCGGCACCAACGCTGCTCGTGTCATCTACGACGGCTGCTTCCTCAGGTACGAGAGCAGCAATTTCTTTGAACAGGCAACAGGGTCTTTCAATTCTGCATCATGTGGAAATCAGACAGCAGAAGGAAGCACAGCATTATTTAACTCAATCATTCAACAAGTGCTAATGAATCTTCAAACAGAAACAACCAGAATCACAGGTTTCTCTGCAGCCACGAAGACGCAAGTACCTAATAATAACAACACAACCGTTTATGCCTATGCACAATGTACTGAAACTATCTCTGAAAGTGGGTGCGAGGATTGCTTGAAACAAAGCTATAACACTATACAGACTTGTCTTCCCAATTCAGATGGTAGGGCTTTTGATGCTGGGTGTTTCATGAGATACTCAACCACTTCCTTCTTTGCTGATAACCAGACCATCAATGTCAGACCCTTCTCCAAACAAGGTTCAAGTAACAAAAAAGGAGGCATTATTGGTGGAGTAGTTGGAGCTGTGGCTCTTGTTTTAGTGCTCTTTTCACTGTTTTCCTGGTGGAGGCATGTTAGACGGTCAAAAAGGTCTAAAAGGGTTCCCAGAGGTGAGATAATGGGAGAATCCAATTTGAGAGCCCCACTTAATTACAATTATAAGGAATTGAAGTCTGCCACCAAGAATTTCAGTGAAAAGAATAAATTAGGAGAAGGAGGATTTGGTACTGTATACAAGGGAACTCTAAAAAACGGAAAAACTGTTGCAGTCAAGAAACTTGCTATGCGACAATCCAACAGGATGGACGAGGAATTTGAGAGTGAAGTGAGGCTAATAAGTAATGTTCATCATCGAAATCTTGTTCGTCTTCTAGGGTGCTGCAGTAAAGGAAACAAGAGAATTCTCGTTTACGAATACATGAAAAACACCAGTCTCGACAGATTCTTATTTGGCAGCAATAAAGGTTCTCTCCGTTGGAAGCAACGATATGATATAATCTTAGGTGTAGCAAGGGGTTTGACCTATCTACACGAAGAATTTCACATTTGTATAATACATAGAGATATAAAGACTAACAACATTCTCCTTGATGATGATTTCCAACCTAAAATTGCCGATTTTGGGTTGGCAAGACTTTTACCCGGGGATCAGACTCATCTTAGCACTAGATTTGCAGGAACATTGGGATACACAGCACCTGAATATGCGATTCATGGCCAGTTATCAGAGAAAGCCGATACCTACAGCTATGGTGTTATAGTCTTAGAAATCATTAGTGGCCAGAAGAGTAGCGAACTAAAAGTTGATGCTCATGCTGATGGCGAATTCCTCCTTCAACAAGCATGGAAACTATATGAGAAAGGCATGCACTTAGGGTTGGTTGACAGTACCTTAGACCCTAATGAGTATGATTCAGAAGAAGTAAAGAAAATCATAGAGATTGGTTTGCTATGCACGCAAGCTTCTCCTGCAATAAGACCAACAATGTCTGAAGTTGTTGTTTTGCTGCAAAGTAAAGAAGGTTTATCGAAGAATATGAGACTCACTAGGCCTCTCTATATTGATACTGATTCAATTTCATCAGGGTTCAAGGGAGACACCTCTACCTATTCTGCTTCCAATTCCAATGCTACTATCTCTACTTCCATGATATCAGCAAGATCATGA 1974 0.425 MLLLPPSITLLIPLFTTFISLNGVVSDPQTYLLNPGCFQYTRLDPADANSFNQSLNEAFQDLSNQNKHFATAQQATGALPVFALFQCRSYLSAADCANCFSAAVAQIRNCSAGTNAARVIYDGCFLRYESSNFFEQATGSFNSASCGNQTAEGSTALFNSIIQQVLMNLQTETTRITGFSAATKTQVPNNNNTTVYAYAQCTETISESGCEDCLKQSYNTIQTCLPNSDGRAFDAGCFMRYSTTSFFADNQTINVRPFSKQGSSNKKGGIIGGVVGAVALVLVLFSLFSWWRHVRRSKRSKRVPRGEIMGESNLRAPLNYNYKELKSATKNFSEKNKLGEGGFGTVYKGTLKNGKTVAVKKLAMRQSNRMDEEFESEVRLISNVHHRNLVRLLGCCSKGNKRILVYEYMKNTSLDRFLFGSNKGSLRWKQRYDIILGVARGLTYLHEEFHICIIHRDIKTNNILLDDDFQPKIADFGLARLLPGDQTHLSTRFAGTLGYTAPEYAIHGQLSEKADTYSYGVIVLEIISGQKSSELKVDAHADGEFLLQQAWKLYEKGMHLGLVDSTLDPNEYDSEEVKKIIEIGLLCTQASPAIRPTMSEVVVLLQSKEGLSKNMRLTRPLYIDTDSISSGFKGDTSTYSASNSNATISTSMISARS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01680 657 SUPERFAMILY Protein kinase-like (PK-like) 315 605 IPR011009 -
Accr3g01680 657 ProSiteProfiles Gnk2-homologous domain profile. 139 246 IPR002902 -
Accr3g01680 657 SMART serkin_6 332 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01680 657 ProSiteProfiles Protein kinase domain profile. 332 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01680 657 FunFam Cysteine-rich receptor-like protein kinase 2 296 408 - -
Accr3g01680 657 ProSiteProfiles Gnk2-homologous domain profile. 33 133 IPR002902 -
Accr3g01680 657 FunFam Cysteine-rich receptor-like protein kinase 2 141 246 - -
Accr3g01680 657 Gene3D Transferase(Phosphotransferase) domain 1 409 619 - -
Accr3g01680 657 Gene3D - 38 133 IPR038408 -
Accr3g01680 657 Gene3D - 138 246 IPR038408 -
Accr3g01680 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Accr3g01680 657 FunFam Cysteine-rich receptor-like protein kinase 2 409 613 - -
Accr3g01680 657 CDD STKc_IRAK 338 606 - -
Accr3g01680 657 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 83 640 - -
Accr3g01680 657 Pfam Salt stress response/antifungal 47 130 IPR002902 -
Accr3g01680 657 Pfam Salt stress response/antifungal 146 243 IPR002902 -
Accr3g01680 657 Pfam Protein kinase domain 332 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01680 657 Gene3D Phosphorylase Kinase; domain 1 293 408 - -
Accr3g01680 657 ProSitePatterns Protein kinases ATP-binding region signature. 338 361 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01680 Accr-Chr3 21113540 21119368 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01680 65 609 Receptor kinase-like Gene Family AT1G70520 40.399 5.58e-129 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr3g01680 Pkinase 1.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01680 - - gmx:100813585 828.165