Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01652 ATGGCCATTCATGATCAAAATGGAGTCACCAGATCTCACAGTATTCCTGTAGGAAATGGAGCATCTTTGAGCTCTGGACTACATTCTGCTGCACGGGTTCATCTAAATGATCAGTTTTCTTGTGGGAATGACTATGCACCAAAGGTAAGGAAACCGTATACTATCACAAAACAAAGAGAGAGATGGACAGATGAAGAGCACAAGAAGTTTCTCGAAGCTTTAAAGCTGTATGGCCGGGCGTGGCGAAAGATTGAAGAGCATGTTGGCACAAAGACTACGGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGGTTCTTCGTGATCCTTGTGGGAACACTATGAACTCGATGGAGTCCATTGAAATCCCACCCCCACGTCCAAAACGAAAGCCTATGCATCCTTACCCTCGTAAGCTGGTAGAGCTCCCTAACAAAGAAGCTTCCGTACAAAAACAGCTAATGATGTCTAATTCTCTGAAATCATCAGATTTTGACCAAGAAAACCAATCTCCCAAGTCAGTGTTATCTGCTGTTGGTTCACAGACCCTTGGTTCCTCTGATTCTGACACACTAAATGGAAGCTCTTCCCCAATTTCATCCATTAGTCCTGTTCATACCAACAACTTTGAAGTTGCTGAACCTGAAAACCTACTGGAGGAGGATGGGTGTCCACCATCGGCTGGACTAAATGCTGATCCAACTCCTGATGAGCAACCACTGATGAAGCATGAAAAGCCATTGAAACACAGCAGATCTTTCAAGGAAGATGCTGCAGAAGAATCATCTGCTAGGATTCTCAAGCTTTTTGGGACGACTTTGTTGATAAAAGATAACTGTGGGCCATCCTCTCCAACAACGGAAGCATGCAAGTTGGTTCACTCAAAATTCTTGCTGATGAAATTTGATGAGAAAAGTTTGCATAATGGAACACATGGTGCTGTCTGTAACATGCAGCTTGAGAGTGGAAATTCAGGGCTTGCAGAAAGTCCTTCTGCTTCTTTTGTTCCATGTCGGAGCATTCCCCACATTAGATCACTGCACACGAAGGTGCCTGAAGGAAAACAACTAGACTCCAATCTTAGGGAAATTGAACATGTAGAAGTTATGAACACTAGCTCTTGCGTAAACAAGGATGAAATATCTGATATGGAAGCCAAAAGAGATACTAAAGCTGTATTTGATCTGAAGAGGTGTGGGAAAGGGTTTGTGCCATATAAGAGGTGCATTGCAGAGAGGGAAAAGCAGGCCTTGTCAGTAACTAAAGAGGAGAGGGAAGGACAAAGGATTCGCCTTTCCTTGTAA 1308 0.4327 MAIHDQNGVTRSHSIPVGNGASLSSGLHSAARVHLNDQFSCGNDYAPKVRKPYTITKQRERWTDEEHKKFLEALKLYGRAWRKIEEHVGTKTTVQIRSHAQKFFSKVLRDPCGNTMNSMESIEIPPPRPKRKPMHPYPRKLVELPNKEASVQKQLMMSNSLKSSDFDQENQSPKSVLSAVGSQTLGSSDSDTLNGSSSPISSISPVHTNNFEVAEPENLLEEDGCPPSAGLNADPTPDEQPLMKHEKPLKHSRSFKEDAAEESSARILKLFGTTLLIKDNCGPSSPTTEACKLVHSKFLLMKFDEKSLHNGTHGAVCNMQLESGNSGLAESPSASFVPCRSIPHIRSLHTKVPEGKQLDSNLREIEHVEVMNTSSCVNKDEISDMEAKRDTKAVFDLKRCGKGFVPYKRCIAEREKQALSVTKEEREGQRIRLSL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01652 435 Pfam Myb-like DNA-binding domain 59 102 IPR001005 -
Accr3g01652 435 CDD SANT 61 104 IPR001005 -
Accr3g01652 435 MobiDBLite consensus disorder prediction 117 145 - -
Accr3g01652 435 Gene3D - 61 107 - -
Accr3g01652 435 PANTHER SWI/SNF COMPLEX-RELATED 33 358 - -
Accr3g01652 435 MobiDBLite consensus disorder prediction 220 260 - -
Accr3g01652 435 FunFam protein REVEILLE 6 isoform X1 61 109 - -
Accr3g01652 435 SUPERFAMILY Homeodomain-like 53 106 IPR009057 -
Accr3g01652 435 MobiDBLite consensus disorder prediction 125 142 - -
Accr3g01652 435 MobiDBLite consensus disorder prediction 163 208 - -
Accr3g01652 435 ProSiteProfiles SANT domain profile. 57 108 IPR017884 -
Accr3g01652 435 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Accr3g01652 435 SMART sant 58 106 IPR001005 -
Accr3g01652 435 MobiDBLite consensus disorder prediction 239 260 - -
Accr3g01652 435 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Accr3g01652 435 NCBIfam myb-like DNA-binding domain, SHAQKYF class 57 106 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01652 Accr-Chr3 20453451 20455850 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr3g01652 Myb_DNA-binding 1.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01652 - - pcin:129303890 602.053