Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01638 ATGCCCTTGGAAGCAGGGATTTTCATAGGGCCACCTGCTTCTTCTTCGTCAACCTCTTGTTCTGCTACTCCGGATCTTTCCCTTCACATAAGCCCTCCTTCAACTTCTTCAACCTCTTCTTCTTTGATTTGCAGCAACACTAACAACAACTATGAAGCTCGGCACTATATTCCTTCTTCCTCTCTCTCTCTCTCTCATGCTCACACTGAACTCTCACTCGCTACCAATTTCACCACTCCTAATTCAACACAAGAACAACTAGTCAGCCTCCACCACCATAGCAAAAACAACAACACCAGCCCTTATTTTCAGACCCACCACCACCATTTCCTCCACCAGAATATGAATAACTATGGAGGAATCTCATTGCTTGATGTCTCTCCTTCTTCTTCCTCCGAAGAATTGAGGCCCATCAAAGGGATTCCCGTCTACCACAACCGCTCGTTCCCTTTCTTGCCGGCGGTAGATAATCACCACCACCACCAGCAGCAAACGAAGATGTGCTTCTACAATCCTTCTTCTCCGTACATGGCGGTGGCGGCTGCCGGGGGGTTGGATCCCGTGTCGGCGGCATACAGGGGGGGCGGCAGGTTTAATAATGGGATTTCAAGAGATGCCTTCAAATCTCCTCATCATCAGTATGGGAACATGGTGGGACCATCTTCTTCTTCACATGAGGCTTCTTCGTCGTCTCCGAGCAGTACTGGGCTCATGATGAGATCCAGATTCTTCCCTAAGCTTCCCACTAAACGCAGCATGAGAGCTCCCAGAATGCGATGGACCACCACCCTCCACGCTCGCTTCGTTCACGCCGTCGAGCTCCTCGGCGGCCACGAAAGAGCAACTCCGAAATCAGTTCTAGAGCTGATGGATGTGAAGGATCTTACCTTAGCTCATGTCAAAAGCCATTTACAGATGTATCGAACTGTTAAGACCACTGACAAGCCTGCAGCTTCTTCAGGCCACTCAGATGGGTCTGGAGAAGATGAAATATTTGCAGATCATAGAGGAAGCAGAACAGATAGGTCAGTGCAGCATGAAATGGACTACTCTTCTACTACCACTACACTATGGAGCAATTCTTCAAGTAGAGAGCCATGGCTTCAAAATAGTACCAAAGACATGGATACTCTGAGACCTGCCTTTCAGACACCACCATTATCATCATCAGGGCATCAAATTCAGGAGTGTGATTCAAGGCATGTGAAGAACAACATATCAAGCTCTAATTTGGAGTGCAAGAACCCAAGCTTGGAGTTTACGTTAGGAAGACCAGATTGGGATGGCAAATGA 1293 0.4795 MPLEAGIFIGPPASSSSTSCSATPDLSLHISPPSTSSTSSSLICSNTNNNYEARHYIPSSSLSLSHAHTELSLATNFTTPNSTQEQLVSLHHHSKNNNTSPYFQTHHHHFLHQNMNNYGGISLLDVSPSSSSEELRPIKGIPVYHNRSFPFLPAVDNHHHHQQQTKMCFYNPSSPYMAVAAAGGLDPVSAAYRGGGRFNNGISRDAFKSPHHQYGNMVGPSSSSHEASSSSPSSTGLMMRSRFFPKLPTKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGEDEIFADHRGSRTDRSVQHEMDYSSTTTTLWSNSSSREPWLQNSTKDMDTLRPAFQTPPLSSSGHQIQECDSRHVKNNISSSNLECKNPSLEFTLGRPDWDGK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01638 430 MobiDBLite consensus disorder prediction 327 346 - -
Accr3g01638 430 Pfam Myb-like DNA-binding domain 257 308 IPR001005 -
Accr3g01638 430 Gene3D - 255 312 - -
Accr3g01638 430 SUPERFAMILY Homeodomain-like 253 309 IPR009057 -
Accr3g01638 430 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 24 429 IPR044847 GO:0000976|GO:0006355|GO:0010158
Accr3g01638 430 MobiDBLite consensus disorder prediction 205 241 - -
Accr3g01638 430 MobiDBLite consensus disorder prediction 215 238 - -
Accr3g01638 430 MobiDBLite consensus disorder prediction 9 39 - -
Accr3g01638 430 MobiDBLite consensus disorder prediction 406 430 - -
Accr3g01638 430 FunFam Myb family transcription factor 254 312 - -
Accr3g01638 430 MobiDBLite consensus disorder prediction 11 39 - -
Accr3g01638 430 NCBIfam myb-like DNA-binding domain, SHAQKYF class 256 309 IPR006447 GO:0003677
Accr3g01638 430 MobiDBLite consensus disorder prediction 312 369 - -
Accr3g01638 430 MobiDBLite consensus disorder prediction 347 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01638 Accr-Chr3 20142181 20146297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01638 126 430 G2-like Transcription Factor Family AT5G16560 50.453 9.22e-78 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr3g01638 Myb_DNA-binding 2.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01638 - - gmx:100815360 400.593