Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01632 ATGAGACCTAACTTGGATCTTGAAGTGGAGGCTTCTGCGGAAAATGAACCCGAAATTAGCAGCCAGGTTGCATCCAACATATTCATTCATGAAATATCTGCAGGTCCTTCTAGTGACAACAGCCTCACCAACAACACATCAGACAACACAAACAACATAGGATTTCAGCTGAACAATGCAGATCCTCTTTCACTTGACTTAACTCTCAGCTTCAATAACAACGAGCAAGGCCCAGCTGGAGACTCCTCAGTGGGGCTCTCATTCTCTAGCACTAGTGAGAGCAGCAACGAACCTGCCTCCCAAACCACATCGGCCCCCATCCAAAGAGTGTTCTCTTGCAACTACTGTCAGCGCAAGTTCTTCAGCTCGCAGGCTCTTGGTGGTCACCAGAACGCACACAAGAGGGAAAGAACACTTGCAAAGAGAGCCATGAGAATGGGGTTTTTCTCTGATAGGTATGCAAATTTAGCATCCCTCCCTCTTCATGGCTCTTTCAGGTCCTTAGGAATTAAAGCGCACTCCTCAATTCACCATGGCTTTTCACCATCAATGGTGAGGCCTTATGAGATGAAAACTAATGCGAGATTCGATGAAGGGTATGCCGGAATGCCTGTGTTTGTGGAGGATGATGAGGCTGAACTGCTATGGCCTGGTAGTTTCCGGCAGGTTGGAGAGGTAAGTGATAATGATGATAATGATCATCCTCGTCATCATCAGAAGTTCGTGGTCACTGGAAGTTCAAATTTGAGTTTTGCAGAAGTGAATCCAGAAGTACACCTTGAGCTAGAGGACTCAACAACACCAGATTTAACATTGAAGCTTTGA 825 0.4606 MRPNLDLEVEASAENEPEISSQVASNIFIHEISAGPSSDNSLTNNTSDNTNNIGFQLNNADPLSLDLTLSFNNNEQGPAGDSSVGLSFSSTSESSNEPASQTTSAPIQRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGFFSDRYANLASLPLHGSFRSLGIKAHSSIHHGFSPSMVRPYEMKTNARFDEGYAGMPVFVEDDEAELLWPGSFRQVGEVSDNDDNDHPRHHQKFVVTGSSNLSFAEVNPEVHLELEDSTTPDLTLKL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01632 274 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 51 189 IPR044246 GO:0009788
Accr3g01632 274 MobiDBLite consensus disorder prediction 69 104 - -
Accr3g01632 274 Gene3D Classic Zinc Finger 89 154 - -
Accr3g01632 274 ProSiteProfiles Zinc finger C2H2 type domain profile. 111 138 IPR013087 -
Accr3g01632 274 SUPERFAMILY beta-beta-alpha zinc fingers 109 138 IPR036236 -
Accr3g01632 274 ProSitePatterns Zinc finger C2H2 type domain signature. 113 133 IPR013087 -
Accr3g01632 274 FunFam Zinc finger protein 2 88 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01632 Accr-Chr3 20022349 20023173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01632 108 274 C2H2 Transcription Factor Family AT1G66140 51.031 3.23e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr3g01632 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01632 - - pcin:129303090 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01632 3 20022349 20023173 Accr3g01632 3 20022349 20023173 CCT
Accr3g01632 3 20022349 20023173 Accr3g01632 3 20022349 20023173 ECH