Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01628 ATGAGGAAAAAATCGCACTTAAAGTTCGAGCTCTTGCTCATTTTCCTTTCTGGGCTATTTTCAGTCTTCGTTTTCGTTGAGTCTCAAGCAAACCCTAGCCCAGATGCTCCTGTGATGGAAGCTCTCAAGAAAAGCCTCAACGTCCCTGATTCTATTGGATGGTCTGGTTCGGACCACTGCAAGTGGAACCATGTTGGCTGCGATGGAGGTCGGGTCACGCGGATCCAAATCGGACGTCTAGGTCTTCAAGGTACGCTTCCTCCGAGTCTTGGAGGTCTCACCGAGCTACAGCGCTTGGAGCTTCAGTATAATAACATTTCCGGTCCTCTTCCTAGCTTAAAGGGTTTGGGTTCTTTGCAAGTGCTTATTCTTAGTAACAACCAATTTAGTTCGATCCCTGGCGATTTTTTTACTGGCATGTCTCAACTTCAATCCGTGGAGATCGACAACAACCCATTTCAGGAATGGGAGATACCTGAAAGTCTTCGAGACGCTTCGACTCTTCAGAACTTCTCGGCCAACTCAGCTAATATCACTGGCAAGATACCAGATTTTCTTAATGGAAATGTGTTTCCTGGTCTGGTCCTTCTGCATTTTTCCTTCAATAACCTCGAGGGTGGGTTTCCGGCAAGCTTTTCTGGTTTGCCGATCGAGACTTTGTGGATTAATGGGCAGACAGGTAAACTTAACGGAACCATAGATTTTATGCAGAATATGACTTCCTTGAAGGAGGTTTGGCTGCATTCGAATGCATTTTCGGGTCCATTACCAGATTTTTCGGGCTTGAAGAGTTTGGAAACCCTGAGTTTAAGGGATAATTCGTTTACTGGTCCTGTTCCTTTGTCACTGATGAGTCTTAAATCGTTGAAAGTTGTTAATTTGACTAATAACTTACTTCAAGGGCCTGTGCCAGTGTTCAGTCCAGGAGTCGAAGTGGATATGAGTAAGGATTCGAATGACTTTTGCTTGCCAAGTCCTGGGGATTGTGATCCTCGGGTGAATATTCTGCTTTCCATTGTTAAACTTATGGGATATCCTCAGAAATTTGCTAAAGAATGGAAGGCCAATGATCCATGTAATGATTGGCTTGGTATTACCTGTAGTAATGGGAACATTACTGTTGTTAATTTTCAGAGGATGGGTCTGTCTGGTACCATATCCCCAGAGTTTGCCTCAATCAAATCACTGCAAAGAATCATGCTTGCTGATAACGATCTCACCGGCACGATTCCAGAGGAGTTCACTACACTTCCTATGCTCACTGAACTGAATCTCTCAAATAATCAGCTTTATGGAAAGGTCCCATCTTTTAGGAGTAATGTAATCGTTAACACTAAGGGTAACAAGGGCATAGGCAAGGATAGAAGCAGTTCAACCCCTCCGGGTGCAGCATCTCTGAACCCCACAGGTCAAGGTACAACAGGAGAAGATGGTGGGATTTCTGCAAATGGTGGCAAAAAATCTTCTCATGTTGCAGTAACTGTAATTGCTGTAGTTGGGGGTGTATTTTTGGTTTCGATTATTGGTGTAATTTTCTTCTGCTTGTATAGAATGAAGCAAAAGAAGTTAAGCAGGGTACAGAGCCCTAATGCTCTGGTAATTCACCCTCGTCATTCTGGATCAGATAACGAGAGTCTGAAAATAACAGTTGCAGGCTCAAGTGTCAGTGTTGGCACGGCTAGTGAAAATCAAACTGTACCCGGCAGTGAGGCAGGAGGAGACATCCAAATGGTTGAAGCTGGAAACATGGTCATTTCCATACAAGTCCTTCGGAACGTGACTGACAATTTCAATGAAAAGAATATATTGGGACAAGGTGGTTTTGGAACAGTATACAAAGGTGAACTTCATGATGGCACCAAAATTGCAGTGAAAAGAATGGAGTCTGGAGCAATAATCGGAAAGGGTGCATCGGAATTTAAGTCAGAAATTGCTGTTTTGACAAAAGTTCGCCACCGGCATCTTGTTGCACTTCTTGGCTACTGCTTGGATGGGAATGAGAAACTTTTGGTGTATGAATACATGCCTCAGGGTACACTAAGTAGGCATCTGTTTAACTGGCCAGAAGAAGGATTACAACCCTTGGACTGGAATAGGAGGTTGACCATTGCCTTAGATGTGGCTAGGGGTGTTGAGTACCTTCATGGCTTAGCACATCAAAGCTTTATACACAGAGACTTAAAGCCCTCAAACATTCTTCTTGGAGATGATATGAGAGCAAAGGTTGCAGATTTTGGTCTTGTCCGTCTTGCTCCAGAAGGAAAAGCCTCAATAGAAACACGAATTGCCGGAACGTTTGGATACTTGGCACCAGAATATGCAGTTACTGGCCGTGTGACGACTAAAGTAGATGTGTACAGTTTTGGGGTGATACTGATGGAAATCATAACTGGAAGGAAAGCGCTTGACGAAACCCAACCCGAGGACAGTATGCACCTTGTCACATGGTTCCGCAGAATGTACATAAATGAAGAATCATTTAGCAAGGCCATTGATCCAACGATCGATCGCAACGACGAAACTCTTGCCAGCATTCGCATAGTGGCAGAGCTAGCTGGCCACTGCTGTGCACGAGAGCCATATCAAAGGCCAGACATGGGTCACGCCGTGAATGTCCTCTCCTCTTTGGCAGAACTCTGGAAGCCATCTGACCAGAGTTCTGAAGATATATATGGAATTGACCTTGACATGTCTTTGCCTCAAGCCCTTAAGAAATGGCAGGCTTATGAAGGTAGAGGAGGAGGAGGAGGCTCAGTGGACTCGTCTTCTTCTTCACTCCTTCCGAGCCTGGACAACACGCAGACAAGTATACCGACATGCCCGTATGGTTTTGCGGAGTCTTTCACATCAGCAGATGGGAGGTGA 2865 0.4482 MRKKSHLKFELLLIFLSGLFSVFVFVESQANPSPDAPVMEALKKSLNVPDSIGWSGSDHCKWNHVGCDGGRVTRIQIGRLGLQGTLPPSLGGLTELQRLELQYNNISGPLPSLKGLGSLQVLILSNNQFSSIPGDFFTGMSQLQSVEIDNNPFQEWEIPESLRDASTLQNFSANSANITGKIPDFLNGNVFPGLVLLHFSFNNLEGGFPASFSGLPIETLWINGQTGKLNGTIDFMQNMTSLKEVWLHSNAFSGPLPDFSGLKSLETLSLRDNSFTGPVPLSLMSLKSLKVVNLTNNLLQGPVPVFSPGVEVDMSKDSNDFCLPSPGDCDPRVNILLSIVKLMGYPQKFAKEWKANDPCNDWLGITCSNGNITVVNFQRMGLSGTISPEFASIKSLQRIMLADNDLTGTIPEEFTTLPMLTELNLSNNQLYGKVPSFRSNVIVNTKGNKGIGKDRSSSTPPGAASLNPTGQGTTGEDGGISANGGKKSSHVAVTVIAVVGGVFLVSIIGVIFFCLYRMKQKKLSRVQSPNALVIHPRHSGSDNESLKITVAGSSVSVGTASENQTVPGSEAGGDIQMVEAGNMVISIQVLRNVTDNFNEKNILGQGGFGTVYKGELHDGTKIAVKRMESGAIIGKGASEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRHLFNWPEEGLQPLDWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMEIITGRKALDETQPEDSMHLVTWFRRMYINEESFSKAIDPTIDRNDETLASIRIVAELAGHCCAREPYQRPDMGHAVNVLSSLAELWKPSDQSSEDIYGIDLDMSLPQALKKWQAYEGRGGGGGSVDSSSSSLLPSLDNTQTSIPTCPYGFAESFTSADGR 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01628 954 Gene3D Ribonuclease Inhibitor 34 329 IPR032675 -
Accr3g01628 954 Pfam Leucine rich repeat N-terminal domain 334 368 IPR013210 -
Accr3g01628 954 Pfam Leucine rich repeat N-terminal domain 35 68 IPR013210 -
Accr3g01628 954 MobiDBLite consensus disorder prediction 448 478 - -
Accr3g01628 954 FunFam Receptor-like kinase TMK4 33 327 - -
Accr3g01628 954 ProSitePatterns Protein kinases ATP-binding region signature. 603 635 IPR017441 GO:0005524
Accr3g01628 954 MobiDBLite consensus disorder prediction 448 484 - -
Accr3g01628 954 Gene3D Transferase(Phosphotransferase) domain 1 675 894 - -
Accr3g01628 954 SUPERFAMILY L domain-like 42 306 - -
Accr3g01628 954 FunFam Leucine-rich repeat receptor-like kinase 331 454 - -
Accr3g01628 954 Gene3D Phosphorylase Kinase; domain 1 559 674 - -
Accr3g01628 954 Pfam Protein kinase domain 597 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01628 954 SMART LRR_typ_2 417 439 IPR003591 -
Accr3g01628 954 SMART LRR_typ_2 116 139 IPR003591 -
Accr3g01628 954 SMART LRR_typ_2 239 261 IPR003591 -
Accr3g01628 954 SMART LRR_typ_2 93 115 IPR003591 -
Accr3g01628 954 FunFam receptor protein kinase TMK1 675 892 - -
Accr3g01628 954 Gene3D Ribonuclease Inhibitor 331 455 IPR032675 -
Accr3g01628 954 ProSiteProfiles Leucine-rich repeat profile. 118 139 IPR001611 GO:0005515
Accr3g01628 954 FunFam receptor protein kinase TMK1 558 674 - -
Accr3g01628 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 722 734 IPR008271 GO:0004672|GO:0006468
Accr3g01628 954 SUPERFAMILY L domain-like 334 440 - -
Accr3g01628 954 CDD STKc_IRAK 603 876 - -
Accr3g01628 954 SUPERFAMILY Protein kinase-like (PK-like) 577 881 IPR011009 -
Accr3g01628 954 Pfam Leucine rich repeat 95 152 IPR001611 GO:0005515
Accr3g01628 954 PANTHER OSJNBA0070M12.3 PROTEIN 19 954 - -
Accr3g01628 954 SMART serkin_6 597 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01628 954 ProSiteProfiles Protein kinase domain profile. 597 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01628 Accr-Chr3 19916774 19920105 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01628 84 879 Receptor kinase-like Gene Family AT5G07280 31.785 4.65e-88 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Accr3g01628 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01628 K00924 - qsa:O6P43_014259 1437.94