Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01604 ATGGGAAGGCAACCTTGCTGTGACAAAGTTGGATTGAAGAAAGGTCCTTGGACTACTGATGAAGACAAGAAACTCATTAACTTCATCCTCACCAATGGCCAATGTTGCTGGAGGACTGTCCCTAAGCTTGCAGGGCTATTGAGATGTGGGAAAAGTTGCAGGCTGAGATGGACCAATTACCTCAGACCAGACTTGAAGAGAGGTCTTCTTTCTGAAGATGAAGAGAAAATGGTGATTGATCTCCACGCTCAGCTTGGGAACAGATGGTCTAAGATTGCGTCTCATCTTCCTGGAAGAACTGATAATGAGATCAAGAACCATTGGAACACACACATCAAGAAGAAGCTCAAGAAAATGGGAATTGACCCTGTTACTCACAAGCCTCTCTCCGATCAACAACAAACCCAGAATAATCCCGCATCACGGATTAATCAAGTTCAGACAACACAACAACATCAGCAACAAAATCAGCAGCAACCTGTGACAACTAGCCTCAAGTTGGATCAAAATGGAGAACCAGAGAAGGTAGAGACGTCATATAAGTCATCATCAACCTTAACTGAATCGAAAGAGGACAACAAGGTTGAAACTCCACTATTTGACGATATCATGAACAGTTTCTGTACTGACGAGGTTCCATTAATTGAACCTGATGAAATTCTAATGCCCCCTGGTCCTACTCCTTCGTCTTCTTCATCGTCCTCCTCCTCCTCTTCTTATTCAAATTCTTCCAACTTCCTCGAAGACCTGGAGCTCCCAGAATTCGAGTGGGCTTGTAATTACAGTAACGATAACATCAACAACAACAACAGTATTATGGGATTGTGGGATGGTGATGATGATTTGATGAGCAGTTTGGATTTGCTTTTGAATGGTGATGACGATGTTGTAGACAGGAGGATGGAAGATTTTGATTCTGCTCTCAAACAATATCCAAGAATGATCACGGATCAAGAATCTTGGGCATATGGGTTATTTTGA 981 0.4251 MGRQPCCDKVGLKKGPWTTDEDKKLINFILTNGQCCWRTVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEDEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHKPLSDQQQTQNNPASRINQVQTTQQHQQQNQQQPVTTSLKLDQNGEPEKVETSYKSSSTLTESKEDNKVETPLFDDIMNSFCTDEVPLIEPDEILMPPGPTPSSSSSSSSSSSYSNSSNFLEDLELPEFEWACNYSNDNINNNNSIMGLWDGDDDLMSSLDLLLNGDDDVVDRRMEDFDSALKQYPRMITDQESWAYGLF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01604 326 Gene3D - 71 116 - -
Accr3g01604 326 MobiDBLite consensus disorder prediction 225 243 - -
Accr3g01604 326 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr3g01604 326 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr3g01604 326 MobiDBLite consensus disorder prediction 123 194 - -
Accr3g01604 326 SMART sant 66 114 IPR001005 -
Accr3g01604 326 SMART sant 13 63 IPR001005 -
Accr3g01604 326 CDD SANT 16 61 IPR001005 -
Accr3g01604 326 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 227 - -
Accr3g01604 326 MobiDBLite consensus disorder prediction 217 243 - -
Accr3g01604 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr3g01604 326 FunFam Myb transcription factor 71 133 - -
Accr3g01604 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr3g01604 326 MobiDBLite consensus disorder prediction 127 169 - -
Accr3g01604 326 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr3g01604 326 CDD SANT 71 112 IPR001005 -
Accr3g01604 326 FunFam MYB transcription factor 11 67 - -
Accr3g01604 326 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Accr3g01604 326 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr3g01604 326 Gene3D - 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01604 Accr-Chr3 19383035 19384326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01604 1 291 MYB Transcription Factor Family AT1G66230 57.860 4.33e-100 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr3g01604 Myb_DNA-binding 5.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01604 K09422 - gmx:100803624 397.127