Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01580 ATGAAGAGAGATTACCCAGATAACAGTAAAATTGGTGGTGGTGTGAAGGCTGAATGTTCGTCAATGTCTAGTGGAAAGATGAAGATGTGGGAGGAAGAGCTCGATGGTTCCGGTGCGATGGATGAGTTGCTGGCGGCTTTGGGCTACAAGGTCCGGTCGTCGGACATGGCGGATGTGGCCCAGAAGCTTGAGAAGCTTGAGATGGTTATGGCCACCTCTCAGGAAGAAGGGATATCTCATCTTGCTTCTGACACTGTCCACTATGACCCCACCGATCTCCATGGTTGGGTTCAAAGCATGCTCACCGAGCTCGACGGTTCACCCAATTGTCTCGATCCGTCGGCGCTGTTGGCCAACCAACAAATTGGTGACAATATTCTACCTTCTGCCGGCTCTTCCGTCGTATCCACTGGCAACTTCTCCAATTCTCAGCAGCAGATTGGGAATCTGTCCACCGTTTACCACGATGATTCCGAGTACGACCTCCGAGCAATTCCTGGCAAGGCGGTGTTCCCACAAAGCAAAACGACAGATAGTGAAAATAGCCCCAAGCGATTGAAAGCTTCACCATCAACTGAATCTGTTCCGTCGCCGGCAACTGTACCAGAGCAAGCGCGTCCGGTGGTTCTCGTTGACTCCCAGGAAAACGGGGTGCGTCTCGTGCACGCGCTGATGGCATGTGCGGAGGCGGTTCAGCAAAACAATTTGAAGCTGGCGGAAGCACTTGTGGAACACGTGGGCCGGCTTGCCGCGTCCCAAGCCGGAGCAATGAGGAAGGTGGCTTCCTGCTTCGCTCAAGCTTTAGCTCACCGGATTTACGGAATCTCACAACCGTCCATCGATTCGGCTCTCTCCGATATGCTTTATATGCATTTCTATGAGTCCTGCCCTTACCTTAAATTCGCCCATTTCACGGCGAACCAAGCTATCCTTGAAGCGTTCGCGACCGCTGACAGAGTTCACGTCATCGATTTCGGGCTCAAGCAGGGGATGCAATGGCCGGCATTGATGCAAGCCCTTGCATTACGACCCGGTGGTCCTCCGACGTTCCGCCTCACCGGAATCGGACCTCCGCAACCGGACAACACCGATGCTCTTCAACAAGTCGGATGGAAATTGGCGCAATTGGCCAAAACAATCGGTGTCCAATTCGAATTCCGCGGGTTCGTCTGCAACAGCTTGGTGGATCTCGAGCCGTCGCTCATCGAGATTCGACCCGGAGAAGCAGTAGCGGTTAACTCCGTTTTCGAACTCCACGAGCTACTGGCCCGACCCGGCGCCATCGACAAGGTCTTGAACACGATCAAGGCTGTGAATCCCAAGATCGTGACTGTGGTGGAGCAAGAAGCAAACCACAACGAGGCGCTTTTCTTGGACCGTTTCACAGAAGCTCTACACTACTACTCAACCATGTTCGACTCACTGGAGGGCTCGTCATCGTCGTCGGGGTTATCGCCGGCGGCAAGGCAGGACGTGCTGATGTCGGAGCTGTATCTAAGGAGACAGATATGCAACGTGGTGGCATGTAAAGGGTTAGAGCGAGTGGAGAGGCACGAGACACTGAGTCAGTGGAGGGGTCGGATGGGATCGGCCGGTTTTGAACCGGTTCACCTGGGTTCGAACGCGTTCAAGCAAGCCAGCATGTTATTGGCAGTGTTCGCCGGTGGAGATGGGTACAGGGTGGAAGAGAACAAAGGTTGCCTTCTCCTAGGGTGGCACACTCGGCCCCTCATAGCCACGTCGGCTTGGAAATTTCCGGCCGGCGAACTTTAG 1773 0.5431 MKRDYPDNSKIGGGVKAECSSMSSGKMKMWEEELDGSGAMDELLAALGYKVRSSDMADVAQKLEKLEMVMATSQEEGISHLASDTVHYDPTDLHGWVQSMLTELDGSPNCLDPSALLANQQIGDNILPSAGSSVVSTGNFSNSQQQIGNLSTVYHDDSEYDLRAIPGKAVFPQSKTTDSENSPKRLKASPSTESVPSPATVPEQARPVVLVDSQENGVRLVHALMACAEAVQQNNLKLAEALVEHVGRLAASQAGAMRKVASCFAQALAHRIYGISQPSIDSALSDMLYMHFYESCPYLKFAHFTANQAILEAFATADRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAKTIGVQFEFRGFVCNSLVDLEPSLIEIRPGEAVAVNSVFELHELLARPGAIDKVLNTIKAVNPKIVTVVEQEANHNEALFLDRFTEALHYYSTMFDSLEGSSSSSGLSPAARQDVLMSELYLRRQICNVVACKGLERVERHETLSQWRGRMGSAGFEPVHLGSNAFKQASMLLAVFAGGDGYRVEENKGCLLLGWHTRPLIATSAWKFPAGEL 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01580 590 MobiDBLite consensus disorder prediction 1 20 - -
Accr3g01580 590 FunFam DELLA protein GAI 39 104 - -
Accr3g01580 590 SMART DELLA_2 41 114 - -
Accr3g01580 590 Pfam GRAS domain family 220 584 IPR005202 -
Accr3g01580 590 MobiDBLite consensus disorder prediction 167 201 - -
Accr3g01580 590 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 180 580 IPR005202 -
Accr3g01580 590 MobiDBLite consensus disorder prediction 172 199 - -
Accr3g01580 590 Gene3D - 39 104 IPR038088 -
Accr3g01580 590 Pfam Transcriptional regulator DELLA protein N terminal 41 108 IPR021914 -
Accr3g01580 590 Coils Coil 56 76 - -
Accr3g01580 590 ProSiteProfiles GRAS family profile. 211 584 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01580 Accr-Chr3 18986289 18988061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01580 26 585 GRAS Transcription Factor Family AT2G01570 59.831 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr3g01580 GRAS 2.3e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01580 K14494 - qsa:O6P43_020590 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01580 3 18986289 18988061 Accr3g01580 3 18986289 18988061 CCT
Accr3g01580 3 18986289 18988061 Accr3g01580 3 18986289 18988061 ECH
Accr3g01580 3 18986289 18988061 Accr13g00158 13 1384759 1387062 ECH