Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01565 ATGGAGAACTTGTTGGGTCTGCTGAGAATTCGCGTCCACAGAGGCGTGAATCTCGCTGTTAGAGATGTTGTAAGCAGCGATCCTTACGTTGTCGTCAAAATGGGCAAGCAGAAACTGAAGACTCGAGTGGTAAAACAGGATCTCAATCCTGAGTGGAATGATGAATTGACCTTATCTATTTCAGATCCTCGTCTCCCAGTCCATCTGCATGTGTATGACAAAGACAGATTCAGTTTTGATGACAAAATGGGGGAGGCTGAGTTTGACATTAATCCCTTTATTGAAGCCGTGAAGATGCGGTTGAAAGACCTCCCGGATGGGACCATTGTCACAAGAATTCCCCCGAACCGACAAAACTGTCTTGCTGAAGAGAGCCATATCCTGTGGAAAGAAGGCAAAGTTGTTCAAAACATGGTCCTAAGACTGAGAAATGTAGAGTCAGGCGAAGTGGAGCTCCAATTGCAATGGATTGACATTCCTGGTTCCAGGGGTTTGTAG 498 0.4578 MENLLGLLRIRVHRGVNLAVRDVVSSDPYVVVKMGKQKLKTRVVKQDLNPEWNDELTLSISDPRLPVHLHVYDKDRFSFDDKMGEAEFDINPFIEAVKMRLKDLPDGTIVTRIPPNRQNCLAEESHILWKEGKVVQNMVLRLRNVESGEVELQLQWIDIPGSRGL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01565 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Accr3g01565 165 CDD C2_ArfGAP 5 148 - -
Accr3g01565 165 SMART C2_3c 7 102 IPR000008 -
Accr3g01565 165 Pfam C2 domain 6 92 IPR000008 -
Accr3g01565 165 Gene3D C2 domain 4 160 IPR035892 -
Accr3g01565 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 157 IPR035892 -
Accr3g01565 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01565 Accr-Chr3 18684005 18686493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01565 38 165 C2H2 Transcription Factor Family AT1G70790 59.231 6.04e-52 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01565 - - jcu:105638578 278.1