Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01563 ATGGTGTTCCAGACGAATCGCCTGAAAATTCATATAAAGAGAGGCTATAATCTTGATATCAGAAATGATCGAACCAGTAATGCTTATGTTGTCATCAAAATGGGTCACCAGGAAATGATGACTGAAGTGGTCCTGGTAAAGAAGAATGCGAGTCCTGAGTGGAATGAAGAGTTGACCTTCGATCTGGAAAATCCACAACCCCCAGTTCAACTTTTTGTGTACAACAAAGGCAGATTCAGGGTTGATTACAAAATGGGGGAGGCTGAGTGTTTCATTAATCAATTTGTGGATGCTGTGAAGAGGATGCCGGAAGGCCTGAGGGATGGAGATATCATCGAAACAATCAATCCGAACCGCCAAAACTGTTTGGCAGACGAGAGCAATATTGTGTGGAAAGATGGAAAAGTTGTTCAAAACATGTTCATCAGACTCAACAATGTCAGATCTGGGGAAGTGGAGATTCAGTTATCAATGGAGTACTGGTGGGGTTTCCTCAAAATTCATGTCCACAGAGGCCTCAATCTTGCTATCAGAGATGTCGTCCGCCGCAGCAGCGATCCTTATATTGTCTTCAAAATGGGCAATGAGCAAGTGCGAACCAGTGTGGTGAGGCAGAATGTGAATCCTGAGTGGAATGAAGAACTGACTTTGTATATTCCAGATCCTCCTCTTCCAGTCCGACTTTATGTGTATGACAGAGACACATTCAGTAGTGATGACGAAATGGGAGAGGCACAGTTTGACATCACTCCAGTTGTTAAAGCTTTGGAAACGGGGTTGGCAGGCCTATTTGATGGAACCACCATACGGCCGAACCGGCAAAACCAGCTTGCGGAAAGGAGCCAAATTGTGTGGGAAGATGGCCAAGTTGTTCAGAACATGGTTCTTAGGCTAAAAAATGTTGAGTCTGGTGAAGTGGAACTTCAATTGCGTTTGAAGCCTCCCATTTCCTGA 954 0.4444 MVFQTNRLKIHIKRGYNLDIRNDRTSNAYVVIKMGHQEMMTEVVLVKKNASPEWNEELTFDLENPQPPVQLFVYNKGRFRVDYKMGEAECFINQFVDAVKRMPEGLRDGDIIETINPNRQNCLADESNIVWKDGKVVQNMFIRLNNVRSGEVEIQLSMEYWWGFLKIHVHRGLNLAIRDVVRRSSDPYIVFKMGNEQVRTSVVRQNVNPEWNEELTLYIPDPPLPVRLYVYDRDTFSSDDEMGEAQFDITPVVKALETGLAGLFDGTTIRPNRQNQLAERSQIVWEDGQVVQNMVLRLKNVESGEVELQLRLKPPIS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01563 317 Gene3D C2 domain 2 109 IPR035892 -
Accr3g01563 317 SMART C2_3c 7 104 IPR000008 -
Accr3g01563 317 SMART C2_3c 164 261 IPR000008 -
Accr3g01563 317 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 163 311 IPR044562 -
Accr3g01563 317 Pfam C2 domain 165 251 IPR000008 -
Accr3g01563 317 Pfam C2 domain 7 94 IPR000008 -
Accr3g01563 317 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Accr3g01563 317 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 145 253 IPR035892 -
Accr3g01563 317 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 96 IPR035892 -
Accr3g01563 317 Gene3D C2 domain 142 313 IPR035892 -
Accr3g01563 317 ProSiteProfiles C2 domain profile. 148 264 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01563 Accr-Chr3 18661670 18664719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01563 149 314 C2H2 Transcription Factor Family AT4G05330 42.353 2.49e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01563 - - cave:132188237 202.986