Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01561 ATGGAGAGGAACACAGAGTTGAGGAAAGGCACCTGGACACATGAGGAAGACAATCTTCTCAGAGCTTGCGTTGACAAGTACGGTGAGGGAAGATGGCATCTTGTTCCTCAAAGAGCTGGTTTGAAGAGATGCAGGAAAAGCTGCAGAATGAGGTGGTTGAATTATCTGAAACCAAACATTAAGAGAGGAGACTTCACTGAAGACGAGGTTGATTTGATTATAAGGCTCCATAAACTAATTGGAAACAGATGGGCTTTGATAGCTGGAAGACTGCTTGGAGGAACCTCGAATGATGTGAAGAACTTCTGGCACACCAAGATGCGCAACATTAAGAAGACACAAGAAAATCACCACCATCATCATCGGATAAAAGAAAAAGAGAAGCAGCTGCAAGAGGAGCTGACAGCGAAAGTAGTAAAAGAAGGTCACGTAGTGATAAAACCTCAGCCTCATGCTTTCTCTGAGAATTCGCCATGGCTAAGGAACAATAAGAATAAGCTTATTGCTACTACAAGTGAAAGTGGTGGCGGTAGGGGTTGTGCTAATGCTTCTATCAGTACTAGTTCTGGTGGCAGTTTTGTTCGGCCGCCGTGTCCTCCTCCTGCTGCTGCTGATTTTAGCAAGGGCCAGTTGTCAGATCAGGAGTGGTGGGAGAGTTTGCTGAAGAATGATAAAGGATATGATGATCAGGGGCAATATGGGAATTCTATGATGGATTGTTTGGACCCAGACTTTCTGCAAATGGAGGGCCTCCCCAGTTGGGAGGAGTCACTGCTCATGAAATTCTGA 789 0.4525 MERNTELRKGTWTHEEDNLLRACVDKYGEGRWHLVPQRAGLKRCRKSCRMRWLNYLKPNIKRGDFTEDEVDLIIRLHKLIGNRWALIAGRLLGGTSNDVKNFWHTKMRNIKKTQENHHHHHRIKEKEKQLQEELTAKVVKEGHVVIKPQPHAFSENSPWLRNNKNKLIATTSESGGGRGCANASISTSSGGSFVRPPCPPPAAADFSKGQLSDQEWWESLLKNDKGYDDQGQYGNSMMDCLDPDFLQMEGLPSWEESLLMKF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01561 262 Gene3D - 6 62 - -
Accr3g01561 262 SMART sant 8 58 IPR001005 -
Accr3g01561 262 SMART sant 61 109 IPR001005 -
Accr3g01561 262 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Accr3g01561 262 Pfam Myb-like DNA-binding domain 62 105 IPR001005 -
Accr3g01561 262 MobiDBLite consensus disorder prediction 170 197 - -
Accr3g01561 262 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Accr3g01561 262 CDD SANT 11 56 IPR001005 -
Accr3g01561 262 FunFam Myb transcription factor 9 61 - -
Accr3g01561 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 111 IPR017930 -
Accr3g01561 262 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Accr3g01561 262 Gene3D - 64 122 - -
Accr3g01561 262 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 4 170 - -
Accr3g01561 262 CDD SANT 65 105 IPR001005 -
Accr3g01561 262 SUPERFAMILY Homeodomain-like 7 103 IPR009057 -
Accr3g01561 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 60 IPR017930 -
Accr3g01561 262 MobiDBLite consensus disorder prediction 170 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01561 Accr-Chr3 18612218 18613846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01561 7 224 MYB Transcription Factor Family AT1G66370 44.934 2.72e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr3g01561 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01561 - K16166 pcin:129304058 272.322