Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01559 ATGGAGAAGAACACAGGTGGTGGGTTGAGGAAAGGGACCTGGACCCATGAGGAAGACGATCTTCTCAGAGCTTGCGTTCACTACTATGGAGAAGGAAAATGGCATCTTGTTCCTCAAAGAGCTGGCTTGAAGAGATGCAGGAAAAGCTGCAGAATGAGATGGTTGAATTATCTGAAACCCAACATCAACCGAACGAGCTTCACTGAAGACGAGGTTGATATGATTCGAAGATGGTCATTGATAGCTGGAAGGCTACCAGGAAGAACAGCGAACGACGTGAAGAACTTCTGGCACACCAACATGCGCAATAGGAAGAAGAAAGAAGAAAGCCAAGAAGCAAAAGCAAAAGAGGTGGTGATGCATAATAATGTAGAGAAGACGACGACAGAAGAAGTAAAACCGCACGTAGTGATAAAACCTCAGCCTCATACTTTCTCTAAGAATTCGCCGTGGCTGAGGAGAAATAATAATAATAATAATAATGAAAATAAGAAGATTGTTTCTGCAAGTGAGGGTGATGCAGCAGCCAGAAGTGAGGGTGATGCAGCAGCCAGAACTAGTTCAGGTGATTTCAAAGAGGGTATTGCAGAGCCATGTCCTGCCGCTGATTTTACGCAGAGAGATCGTCATCAGTCTGAAGAGTGGTGGGAGAGTTTAATGGACAAGGAAGTAGATGAAGGGCAGTTTGGGCATTTCGCCATGGAGCTTTGGGACTATGACTTTCTAAATATGGAAGGTCAATTTGGGGAAGGCAAGAGCTGTTGGGGTTCATGTAAGTTCTAA 783 0.447 MEKNTGGGLRKGTWTHEEDDLLRACVHYYGEGKWHLVPQRAGLKRCRKSCRMRWLNYLKPNINRTSFTEDEVDMIRRWSLIAGRLPGRTANDVKNFWHTNMRNRKKKEESQEAKAKEVVMHNNVEKTTTEEVKPHVVIKPQPHTFSKNSPWLRRNNNNNNNENKKIVSASEGDAAARSEGDAAARTSSGDFKEGIAEPCPAADFTQRDRHQSEEWWESLMDKEVDEGQFGHFAMELWDYDFLNMEGQFGEGKSCWGSCKF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01559 260 SUPERFAMILY Homeodomain-like 11 102 IPR009057 -
Accr3g01559 260 ProSiteProfiles Myb-like domain profile. 59 101 IPR001005 -
Accr3g01559 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 105 IPR017930 -
Accr3g01559 260 Gene3D - 8 64 - -
Accr3g01559 260 CDD SANT 66 101 IPR001005 -
Accr3g01559 260 Gene3D - 66 132 - -
Accr3g01559 260 MobiDBLite consensus disorder prediction 142 167 - -
Accr3g01559 260 SMART sant 63 103 IPR001005 -
Accr3g01559 260 SMART sant 10 60 IPR001005 -
Accr3g01559 260 Pfam Myb-like DNA-binding domain 11 58 IPR001005 -
Accr3g01559 260 ProSiteProfiles Myb-like domain profile. 6 58 IPR001005 -
Accr3g01559 260 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 8 218 - -
Accr3g01559 260 FunFam Myb transcription factor 11 63 - -
Accr3g01559 260 CDD SANT 13 58 IPR001005 -
Accr3g01559 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Accr3g01559 260 MobiDBLite consensus disorder prediction 141 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01559 Accr-Chr3 18583007 18584513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01559 8 149 MYB Transcription Factor Family AT1G66370 55.629 2.76e-49 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr3g01559 Myb_DNA-binding 4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01559 - K09422 pcin:129304058 322.783