Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01539 ATGGGTTGCTGCTATAGTACGAGGATCAAATCTGAAAGCCCTTCACGCAAGGCTGTGGATTTTACCCATGATAAGAAAGAAGACGATGGTTCCTTCGGTGGCAGCAAAAAAGTCTCCCAAATGAAAATTTTCACATATAATGTGCTAAAAACAGCTACAAGGAACTTTCATAGCGACCATGTGGTGGGCGAAGATGGGTTTGGTGTTGTATTTAGGGGGTGGTTTGATGAGCAGACACTTGCACCTGCTAAACCTGGCACTGGGATAGTCTTTGCTGTCAAGAAGGTTAAACAAGATGGCTTTCTAGGACGCAATGAATGGTTGACGGAGATAAATTTTCAGGGACAGCTGCATCATCCTAACATTGTGAAATTAATTGGCTACTGCTTAGAGGATGAGCACCGCCTTTTGGTATACGAGTTTTTGACCAAAGGCAGCTTGGCAGATCATAAATCAGGAAGTGGGACATTTCATGTTGAACCACTTTCTTGGAGCAACCGCATGAAAATTGCCCTTGGTGCTGCCAAAGCTCTTGCATTTCTTCATAGTGACAGAGTAAATGTGATATATCGAGATCTAAAACCTTCTGGAATCTTGCTTGATTCAAACTTCAATGCAAAACTGTCTGATTTTGCTTTGGCAAGGGCTGGGCCATCGGGTGATGAGAGCCATGTCTCTACAAGAGTCATGGGGACCTTTGGCTATGCTGCTCCTGAGTATATAGCCACAGGTCACCTGACCAAGAAATGTGATGTATACTCTTTTGGGGTTGTCCTCCTTGAAATTCTGTCAGGAAAACGTGCATTTGACTGGGAAAGGCCAGCCAGGGAACAGAATTTAGTTGAATGGGCCAAGCCGTACCTTTCGAGCAAGCGCCGGATTTTCCAAATAATGGATACCCATATCGAAGGCCAGTACCAAGTTCGTGAAGCCCTGAAAGTGGCAAAACTTACGATCCAATGCCTGTCTCCAGAGCCCCCGTTGAGACCGACCATGGTCGATGTGGTAAGTGCGTTGGAACAGCTTCAGGATTCCAGTGATACAGGTAGCTCAAAGCTGCAGCAGTGTTCCTAA 1074 0.4553 MGCCYSTRIKSESPSRKAVDFTHDKKEDDGSFGGSKKVSQMKIFTYNVLKTATRNFHSDHVVGEDGFGVVFRGWFDEQTLAPAKPGTGIVFAVKKVKQDGFLGRNEWLTEINFQGQLHHPNIVKLIGYCLEDEHRLLVYEFLTKGSLADHKSGSGTFHVEPLSWSNRMKIALGAAKALAFLHSDRVNVIYRDLKPSGILLDSNFNAKLSDFALARAGPSGDESHVSTRVMGTFGYAAPEYIATGHLTKKCDVYSFGVVLLEILSGKRAFDWERPAREQNLVEWAKPYLSSKRRIFQIMDTHIEGQYQVREALKVAKLTIQCLSPEPPLRPTMVDVVSALEQLQDSSDTGSSKLQQCS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01539 357 SUPERFAMILY Protein kinase-like (PK-like) 38 341 IPR011009 -
Accr3g01539 357 PANTHER OS01G0588500 PROTEIN-RELATED 38 343 - -
Accr3g01539 357 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 142 353 - -
Accr3g01539 357 ProSiteProfiles Protein kinase domain profile. 56 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01539 357 FunFam Serine/threonine-protein kinase BIK1 23 141 - -
Accr3g01539 357 Gene3D Phosphorylase Kinase; domain 1 26 141 - -
Accr3g01539 357 Gene3D Transferase(Phosphotransferase) domain 1 142 356 - -
Accr3g01539 357 Pfam Protein kinase domain 85 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01539 Accr-Chr3 18275386 18278348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01539 42 347 Glycoside Hydrolase AT3G07070 46.429 4.61e-93 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr3g01539 Pkinase 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01539 - - gmx:100800735 476.092