Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01538 ATGGGTGGTTGCTATAGCGCGGGGATCAAATCTGAAAACAGCTCACGCAAGGCGGTAAATTTGACCCATGATAGCAAAGAAGAGGATGGTTCGATTGGTGGAAGCAATAAGGTCTCCCAATTGAAAATTTTCACATATAATGAGCTAAAAGCAGCTACAAGGAACTTTCATCCAGACTATAAAGTTGCTGAAGGTTGGTTTGGTAATGTATTTAAGGGGTGGCTTGATGAGCATACGCTTGCACCTGCTAAACCAGGCACTGGGATATTTGCCGTTGCTGTGAAGAAACTTAAAAAAGATGGCTTCGATGGGGACAAAGAGTGGTTGGAGAGACAGATCAATTTTCTAGGACAGCTGCATCATCCTAACCTTATGAAATTGCTCGGCTACTGCTTAGAGGGTCAGGACGTGCTTTTGGTACATGAGTTTTTGACCAAAGGCACTTTGGATAATTATTTATTTCAAAGGACATGTCATGGTGAACCACTTTCTTGGAGCAACCGTATGAAAATTGCCCTTGAAGCTGCCAAGGCTCTTGCATTTCTTCATACTGACGAAGTAAATGTGATACATCAAAATTTAAAAGCCTCTCGGATCTTGCTTGATTCAAACTTCAATGCAAAGGTATCTTATTTTGTTTTGGCAAAGGACAGGCCACTTGATGTTAACGCCCGCGTCATCTTTAATTGGAGAGACTCTGGATATAAGGCTCCTGAGTTTGTAGCCTCAGGTCACCTAACCAAGAAGTGTGATGTATACTCTTTTGGGGTTGTTCTCCTTGAAATTCTGTCAGGCAAATGCGCATTGGATTGTACAAGGCCAGACAGGGAGCGTAATTTAGTTGAATGGGTCAAGCCATACCTTTCGAGCAAGCACGGGATTTTCCAAGTTATGGATGCTCGTATGGAAGGCCAGTACCAAGTGCATGAAGCCATGAAAGTTGCAGAACTCGCAATTCAATGCCTGTCTAAATTACCCCGGTTGAGACCAACCATGGCTGATGTGGTAAGTTCATTGGAACAGCTTCAGGATTCCAGTGTGATGCAGGTAGCTCAAAGCAGTAGCAATATTAGTGTTCCTAATTAA 1086 0.43 MGGCYSAGIKSENSSRKAVNLTHDSKEEDGSIGGSNKVSQLKIFTYNELKAATRNFHPDYKVAEGWFGNVFKGWLDEHTLAPAKPGTGIFAVAVKKLKKDGFDGDKEWLERQINFLGQLHHPNLMKLLGYCLEGQDVLLVHEFLTKGTLDNYLFQRTCHGEPLSWSNRMKIALEAAKALAFLHTDEVNVIHQNLKASRILLDSNFNAKVSYFVLAKDRPLDVNARVIFNWRDSGYKAPEFVASGHLTKKCDVYSFGVVLLEILSGKCALDCTRPDRERNLVEWVKPYLSSKHGIFQVMDARMEGQYQVHEAMKVAELAIQCLSKLPRLRPTMADVVSSLEQLQDSSVMQVAQSSSNISVPN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01538 361 ProSiteProfiles Protein kinase domain profile. 56 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01538 361 SUPERFAMILY Protein kinase-like (PK-like) 37 341 IPR011009 -
Accr3g01538 361 PANTHER OS01G0588500 PROTEIN-RELATED 27 343 - -
Accr3g01538 361 Gene3D Transferase(Phosphotransferase) domain 1 144 359 - -
Accr3g01538 361 FunFam Serine/threonine-protein kinase BIK1 23 143 - -
Accr3g01538 361 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 144 353 - -
Accr3g01538 361 Gene3D Phosphorylase Kinase; domain 1 26 143 - -
Accr3g01538 361 Pfam Protein tyrosine and serine/threonine kinase 61 339 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01538 Accr-Chr3 18244454 18247828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01538 10 339 Glycoside Hydrolase AT3G07070 38.988 1.10e-71 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr3g01538 PK_Tyr_Ser-Thr 7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01538 - - gmx:100800735 397.897