Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01534 ATGGCAATCGGAGTCATGGAGGTGCTTCTTGTTAAAGCTAAGGGCCTTCCTCAGACTGATCTCTTTGCTCGGATCGATCCCTACGTTCTGATACAGTATAAAGGCCAAGAGCGCCGAAGTAGCGTCCTCCATGAGGGAGGTAGCAATCCAGTGTGGAACGAGAAATTTGTATTTAGAGCAGAATATCCAGGATCAGGCGACCAATTCAAGCTCATCTTTAAAATCAAGGACAAGGACTTTTTCTCTTCTGATGACTTCCTTGGTCAAGCCGAAATATACGTGAAGGATTTGTTGGCTATAGGAGCAGAAAATGGAAAGGCTGAGCTTCGTCCTCAAAAGTATAGAGTAGTTGGTGCAGATCAATCTTACTGTGGAGAGATCGAAGTTGGTATAACTTTCACCCTTGAGGAAGAAGAAGGATCTCTTGGTGAAGACATTGGAGGATGGAAGGAAAGCGACTACTAG 465 0.4473 MAIGVMEVLLVKAKGLPQTDLFARIDPYVLIQYKGQERRSSVLHEGGSNPVWNEKFVFRAEYPGSGDQFKLIFKIKDKDFFSSDDFLGQAEIYVKDLLAIGAENGKAELRPQKYRVVGADQSYCGEIEVGITFTLEEEEGSLGEDIGGWKESDY 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01534 154 Pfam C2 domain 6 103 IPR000008 -
Accr3g01534 154 SMART C2_3c 5 106 IPR000008 -
Accr3g01534 154 PANTHER C2 DOMAIN-CONTAINING 3 138 - -
Accr3g01534 154 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Accr3g01534 154 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 134 IPR035892 -
Accr3g01534 154 Gene3D C2 domain 2 134 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01534 Accr-Chr3 18214769 18216722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01534 3 109 C2H2 Transcription Factor Family AT4G21160 31.776 9.64e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01534 - - gmx:100500493 233.417