Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01524 ATGAGTTTTGTTTTAAGAGGAACAAGAGCAGACATAGAAACCGGATTTCCTGGATTTATTCCTGAGAGGCATGGATTGCGTGTTCATGCAGCCCGGCCTACTAATTCCAATTCACTTACTTTTCTGGTCACAGTTCTCCTGTTATTCATGATTCTGAATTCTCACCAGATGTCACCAAATTTTCTGCTTTGGCTCGTGCTAGGAGTCTTCTTGATGGCTACAATGTTAAGGATGTATGCAACTTGTCAGCAGCTTCAAGCTGAGGCTCATGCCCATGCAGCAGCAGGCAGTGGTGGCCTTCTTGGGCACACTGAAGTACGTTTGCACATGCCACCATCAATGGCACTTACCACCCGAGGACGTCTACAGGGCCTTAGACTCCAGCTTGCACTTCTTGATCGGGAGTTTGATGATTTAGATTATGAAACTTTAAGAGCACTGGATTCAGATAATGCTCCACCTGCACCTTCTATGACTGATGAAGAGATAAATGCTCTTCCTGTTCACAAATACAAGGGTTCTGGTCTCCAAAAGAAATCCTTAATGCAACAGACCTCATCTTCCACCTTTGCTGAGAAGAAGCAAGATGCATCAAATGCAGTTGGTAGTACAAAAGGTTCTGATGATGAGCTGACGTGCAGTGTATGTTTGGAGCAAGTTAACGTTGGGGATCTACTCCGCAGCTTGCCCTGCTTACATCAGTTCCATGCCAATTGCATCGACCCATGGCTGCGGCAACAAGGAACATGTCCTGTATGTAAGTTCAGAGCAGGATCTACTTGGCATGAGGGTGAACAGAATGAAGTTGACGCTTCAGACATGGTTTGA 828 0.4553 MSFVLRGTRADIETGFPGFIPERHGLRVHAARPTNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAEAHAHAAAGSGGLLGHTEVRLHMPPSMALTTRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPPAPSMTDEEINALPVHKYKGSGLQKKSLMQQTSSSTFAEKKQDASNAVGSTKGSDDELTCSVCLEQVNVGDLLRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSTWHEGEQNEVDASDMV 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01524 275 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 187 259 IPR013083 -
Accr3g01524 275 ProSiteProfiles Zinc finger RING-type profile. 213 254 IPR001841 -
Accr3g01524 275 Pfam Ring finger domain 212 254 IPR001841 -
Accr3g01524 275 SUPERFAMILY RING/U-box 208 257 - -
Accr3g01524 275 SMART ring_2 213 253 IPR001841 -
Accr3g01524 275 PANTHER TARGET OF ERK KINASE MPK-1 1 259 - -
Accr3g01524 275 CDD RING-H2_PA-TM-RING 212 254 - -
Accr3g01524 275 MobiDBLite consensus disorder prediction 182 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01524 Accr-Chr3 17977518 17980324 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01524 1 275 C3H Transcription Factor Family AT3G55530 73.646 2.25e-136 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01524 K16283 - gmx:100777936 414.461