Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01523 ATGAGTTTTGTTTTAAGAGGAACAAGAGCAGACATAGAAACCGGATTTCCTGGATTTATTCCTGAGAGGCATGGATTGCGTGTTCATGCAGCCCGGCCTACTAATTCCAATTCACTTACTTTTCTGGTCACAGTTCTCCTGTTATTCATGATTCTGAATTCTCACCAGATGTCACCAAATTTTCTGCTTTGGCTCGTGCTAGGAGTCTTCTTGATGGCTACAATGTTAAGGATGTATGCAACTTGTCAGCAGCTTCAAGCTGAGGCTCATGCCCATGCAGCAGCAGGCAGTGGTGGCCTTCTTGGGCACACTGAAGTACGTTTGCACATGCCACCATCAATGGCACTTACCACCCGAGGACGTCTACAGGGCCTTAGACTCCAGCTTGCACTTCTTGATCGGGAGTTTGATGATTTAGATTATGAAACTTTAAGAGCACTGGATTCAGATAATGCTCCACCTGCACCTTCTATGACTGATGAAGAGATAAATGCTCTTCCTGTTCACAAATACAAGGGTTCTGGTCTCCAAAACAGGAAATCCTTAATGCAACAGACCTCATCTTCCACCTTTGCTGAGAAGAAGCAAGATGCATCAAATGCAGTTGGTAGTACAAAAGGTTCTGATGATGAGCTGACGTGCAGTGTATGTTTGGAGCAAGTTAACGTTGGGGATCTACTCCGCAGCTTGCCCTGCTTACATCAGTTCCATGCCAATTGCATCGACCCATGGCTGCGGCAACAAGGAACATGTCCTGTATGTAAGTTCAGAGCAGGATCTACTTGGCATGAGGGTGAACAGAATGAAGTTGACGCTTCAGACATGGTTTGA 831 0.4561 MSFVLRGTRADIETGFPGFIPERHGLRVHAARPTNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAEAHAHAAAGSGGLLGHTEVRLHMPPSMALTTRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPPAPSMTDEEINALPVHKYKGSGLQNRKSLMQQTSSSTFAEKKQDASNAVGSTKGSDDELTCSVCLEQVNVGDLLRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSTWHEGEQNEVDASDMV 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01523 276 SUPERFAMILY RING/U-box 209 258 - -
Accr3g01523 276 CDD RING-H2_PA-TM-RING 213 255 - -
Accr3g01523 276 ProSiteProfiles Zinc finger RING-type profile. 214 255 IPR001841 -
Accr3g01523 276 Pfam Ring finger domain 213 255 IPR001841 -
Accr3g01523 276 SMART ring_2 214 254 IPR001841 -
Accr3g01523 276 MobiDBLite consensus disorder prediction 182 206 - -
Accr3g01523 276 PANTHER TARGET OF ERK KINASE MPK-1 1 260 - -
Accr3g01523 276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 188 260 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01523 Accr-Chr3 17977518 17980324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01523 1 276 C3H Transcription Factor Family AT3G55530 74.007 1.62e-138 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01523 K16283 - gmx:100816448 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01523 3 17977518 17980324 Accr3g01523 3 17977518 17980324 ECH