Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01511 ATGCAAAAGTACATGGTTAGGACAACGACAGGGCTTGGCTCTTCATGTGGAGCTTGCAAGTTCCTGCGGAGAAAGTGTACTGCTGATTGCATATTTGCTCCTTACTTCTCCTATGACCAGGCTGCTACCCACTTCGCAGCAGTGCACAAGGTTTTTGGTGCAAGTAACGCCTCTAGGCTACTGCTACACCTACCGGTGCAGAGTAGAAGCGATGCAGCCATCACTGTGTCTTATGAGGCACTCGCTCGGATGCATGATCCGATATATGGTTGTGTTGCTCAAATCTTTGCCCTGCAGCAACAGGTTGCAAGCTTGCAAGAGGAAATAGATAAACTTGGTAATATGATGGCCAACTCTCCCGTTGGCGCTGCAATTTCTGGTGGCAGTTCTCAGGCCTCGACAAGCAAAAACATGGACAGAATAGATTTTTCTTGGCAGCAAGATGTAACAAATGCGCAACTTTATCAGACTCAACTATCTACTCTGCTTTCTCACCAAGCAAGTGCTGCTGCAGCATACCAAGGCTTGGAAGGACAGGTGAATTGGGATTTTCCAGATGCTCTTCAATTTGAAGACCATGTATTTGATGAGTCTGACCCTAATTCATTAGAGAAGCTCATATCAGGAATTGACCAACAGGTTTTCATCAATTTTCCTTGGTCCTAA 666 0.458 MQKYMVRTTTGLGSSCGACKFLRRKCTADCIFAPYFSYDQAATHFAAVHKVFGASNASRLLLHLPVQSRSDAAITVSYEALARMHDPIYGCVAQIFALQQQVASLQEEIDKLGNMMANSPVGAAISGGSSQASTSKNMDRIDFSWQQDVTNAQLYQTQLSTLLSHQASAAAAYQGLEGQVNWDFPDALQFEDHVFDESDPNSLEKLISGIDQQVFINFPWS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01511 221 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
Accr3g01511 221 Coils Coil 95 115 - -
Accr3g01511 221 PANTHER LOB DOMAIN CONTAINING PROTEIN 11 164 - -
Accr3g01511 221 Pfam Lateral organ boundaries (LOB) domain 15 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01511 Accr-Chr3 17819694 17820436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01511 13 118 AS2 family AT5G06080 73.585 1.49e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr3g01511 LOB 2.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01511 K13945 - gmx:100787638 223.787