Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01507 ATGGCGAACCGGTGGTGGGCTGGGAACGTGGCAATGAGACCGAAAGATCCCTTATTGTCTTCTCCATCACTTCAGCTGAGAAACCCAGAAGATGACCATGGTGGACTGAGCCGACTCGGTCCAAGACGCGAGCAAGACTTTCTTCTGGAAAACACCAATAACAACGCTACCACTACTCCAACCAATAGCAGCAATAGCAACACTAACGCCAACACAAACACCACCTCCCAGAGCCAGAACGTCGCCGACGATGACGAGAGCCGACACAACGATGATCAAAACCCAGGTACCCATGACGCCGCTGCCACCGAGCCAGGAAGCAGCAGCGGCCGACGTCCCCGAGGCCGCCCGGCCGGGTCGAAGAACAAGCCCAAGGCACCGGTGGTACTAACAAAGGAGAGCCCCAATGCCCTCCGGAGCCACGTGTTGGAAATCTCAAGCGGCAGTGATGTCGCCGAGAGCCTCTCCACCTTCGCGAACCGGCGCCATCGTGGAGTGTCCGTGCTCAGCGGAAGCGGCATTGTAACCAATGTTACACTCCGGCATCCATCAGCTCCCGGTGGGGTTATCACACTAAACGGAAGGTTCGAGATTCTGTCACTATCAGGGGCATTTTTGCCGGCCCCTTCGCCACCCGGGGCCACTGGGCTAACCGTGTACCTCTCTGGAGGACAAGGGCAGATTGTTGGTGGGAATGTGGTGGGTTCACTGGTAGCATCAGGGCCAGTACTGGTGATTGCAGCCACATTCGCTAATGCAACTTATGAGAGGTTGCCACTTGAGGAAAATGAGCCATCTGGGGAAGAAGTAGAAGTGCAACAAGCACAACAGCAACAACAATCAGGAACTGCTGGGCCTTCAGCTTCTCAAAGTTTGAATGAACAAGTTTCAATGCCAATGTTCAATAACATGCCCCCAAATTTGATGCCAAGTAATGATCACATGCCTCATGATCTGTTCTGGGCGCCTCCTGGTCGCCAACCTCCGCCTTACTGA 996 0.5472 MANRWWAGNVAMRPKDPLLSSPSLQLRNPEDDHGGLSRLGPRREQDFLLENTNNNATTTPTNSSNSNTNANTNTTSQSQNVADDDESRHNDDQNPGTHDAAATEPGSSSGRRPRGRPAGSKNKPKAPVVLTKESPNALRSHVLEISSGSDVAESLSTFANRRHRGVSVLSGSGIVTNVTLRHPSAPGGVITLNGRFEILSLSGAFLPAPSPPGATGLTVYLSGGQGQIVGGNVVGSLVASGPVLVIAATFANATYERLPLEENEPSGEEVEVQQAQQQQQSGTAGPSASQSLNEQVSMPMFNNMPPNLMPSNDHMPHDLFWAPPGRQPPPY 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01507 331 MobiDBLite consensus disorder prediction 269 309 - -
Accr3g01507 331 Gene3D - 138 279 - -
Accr3g01507 331 MobiDBLite consensus disorder prediction 47 81 - -
Accr3g01507 331 SUPERFAMILY AF0104/ALDC/Ptd012-like 135 263 - -
Accr3g01507 331 MobiDBLite consensus disorder prediction 1 135 - -
Accr3g01507 331 FunFam AT-hook motif nuclear-localized protein 138 265 - -
Accr3g01507 331 ProSiteProfiles PPC domain profile profile. 135 274 IPR005175 -
Accr3g01507 331 MobiDBLite consensus disorder prediction 262 331 - -
Accr3g01507 331 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 68 322 IPR014476 GO:0003680
Accr3g01507 331 MobiDBLite consensus disorder prediction 31 45 - -
Accr3g01507 331 CDD DUF296 139 250 IPR005175 -
Accr3g01507 331 Pfam Plants and Prokaryotes Conserved (PCC) domain 139 251 IPR005175 -
Accr3g01507 331 PIRSF ESCAROLA 51 331 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01507 Accr-Chr3 17719221 17720216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01507 1 331 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 50.588 1.07e-77 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01507 - - qsa:O6P43_020634 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01507 3 17719221 17720216 Accr3g01507 3 17719221 17720216 CCT
Accr3g01507 3 17719221 17720216 Accr3g01507 3 17719221 17720216 ECH