Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01506 ATGGCGAATCGGTGGTGGGCTGGTAACGTCGCAGTGAGACCGAAAGATCCTTTGTCTTCGTCTCCATCACTTCATCTGAGGAAACCAGAGGATGACAATGGCGTGTTAAACCGGTTCGGTCCGGTTCGAATGCAAGATTTTCTGGAAAGCACCAATAACAACACCACTCCGAGCAATAGCAGCAACAGCAACACTAACCCCAACACAAACACAACCTCCCAAAGCCAGAACGCCGATGAAGGTGACAGCCGAGATAACGGCCGGGAAGCTGATGATCAGAACATGGGTGGTAGCCATGACGGCGCTGAGCCGGGCAGCAAAGAACGGCGTCCCCGAGGCCGCCCTCCTGGGTCGAGGAACAAGCCGAAGCCACCAGTGGTTGTGACAAAGGAGAGTCCCAACGCCCTCCGGAGCCACGTGCTGGAGATCTCCAGCGGCAATGATGTCGCCGAGAGCCTCTCCACCTTCGCCAACCGGAGGCACCGCGGGGTGTCGGTGCTCAGCGGAAGCGGCATTGTAACCAATGTCACTCTCCGGCAACCGGCGGCACCGGGTGGGGTTATCACACTAAACGGAAGGTTCGAGATTCTGTCACTATCCGGGGCATTCTTGCCGGCACCCTCGCCTCCCGGGGCCACCGGGCTAACCGTGTACTTAGCCGGTGGGCAAGGGCAAGTTGTTGGCGGCGCCGTGGTGGGTTCACTGGTAGCATCAGGGCCAGTACTGGTGATTGCAGCCACATTCGCTAATGCGACTTATGAGAGGCTACCACTTGAGGATGATCCATCTGGGGAAGAAGTTGAAACACAGACACCAAAACACGTAGGAGTGAATAATAATAATAATAATTCAGCAACTTCAGCTGGGCCTAATCCTTCAACATCTCAAGCTCTGAACGAACAAGTTTCGATGCCTGTGTTCAATAATTTGCCTCCAAATTTGGTGCCAAACAGTGATCATCAACAAATGCAACATGACGTGTTCTGGGGTGCCCCTGCTCGCCATCCTCCTCCTTTCTGA 1020 0.548 MANRWWAGNVAVRPKDPLSSSPSLHLRKPEDDNGVLNRFGPVRMQDFLESTNNNTTPSNSSNSNTNPNTNTTSQSQNADEGDSRDNGREADDQNMGGSHDGAEPGSKERRPRGRPPGSRNKPKPPVVVTKESPNALRSHVLEISSGNDVAESLSTFANRRHRGVSVLSGSGIVTNVTLRQPAAPGGVITLNGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGAVVGSLVASGPVLVIAATFANATYERLPLEDDPSGEEVETQTPKHVGVNNNNNNSATSAGPNPSTSQALNEQVSMPVFNNLPPNLVPNSDHQQMQHDVFWGAPARHPPPF 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01506 339 MobiDBLite consensus disorder prediction 46 80 - -
Accr3g01506 339 MobiDBLite consensus disorder prediction 257 297 - -
Accr3g01506 339 MobiDBLite consensus disorder prediction 272 297 - -
Accr3g01506 339 PIRSF ESCAROLA 46 339 IPR014476 GO:0003680
Accr3g01506 339 Gene3D - 136 267 - -
Accr3g01506 339 CDD DUF296 137 219 IPR005175 -
Accr3g01506 339 MobiDBLite consensus disorder prediction 1 130 - -
Accr3g01506 339 ProSiteProfiles PPC domain profile profile. 133 271 IPR005175 -
Accr3g01506 339 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 65 330 IPR014476 GO:0003680
Accr3g01506 339 MobiDBLite consensus disorder prediction 81 115 - -
Accr3g01506 339 SUPERFAMILY AF0104/ALDC/Ptd012-like 133 260 - -
Accr3g01506 339 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 249 IPR005175 -
Accr3g01506 339 FunFam AT-hook motif nuclear-localized protein 136 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01506 Accr-Chr3 17690325 17691344 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01506 1 339 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 52.616 2.82e-78 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01506 - - qsa:O6P43_020634 375.17