Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01502 ATGGAAGGATCTCACCATTCTCATCCTCAACATCATCATCACTACCTGATGTGGCTGAAGAGGAAGCAAATGTTGAAGTCACATATTGAATCAGCGGCTAAGTCATCGTCATTGGAAGAGAGGGCTTTTGCAGAAGACGCCGCCAGGATTCTTGGTGGCTACGTTTGGCCTCCAAGATCTTACTCTTGTACTTTCTGCAAAAGAGAGTTCAGGTCTGCTCAAGCTCTTGGAGGTCACATGAATGTTCACAGGAGAGATAGAGCCAGGCTCAAACAGACTCAAGCAACTTGTCTTCCTCTTCATGATTGTACTAATAATAAGAGATCTTCTGATTCTGAAGAAGTAATCGTCGCCAATAATAATGGAAGGCAACAAGAAGAAGATGATTTTGCAAGCTTCGCCAGTCATCATCATAATAATAATAATCATTATTATGTTGGAACAGACTTGTCCATGGGATTATTACCTGCATCATCATCATCATCACCTGATGAAGAAGCTTTAAGTTGTAAGAGACCTAAGATTTCTTCCAATAATATTTCTTCTTCATCAGTACAGCTTCCTGTCTTCATCAAGCCTTTCTCAAGCGATCATGCAGAAATGGAGATTGGAGTTCATAATAAGCCTAAAATAATGGAAGACTTGGATCTTGAACTCAGGCTGGGGAAATCACAGAAAGTTAAGTGA 687 0.4047 MEGSHHSHPQHHHHYLMWLKRKQMLKSHIESAAKSSSLEERAFAEDAARILGGYVWPPRSYSCTFCKREFRSAQALGGHMNVHRRDRARLKQTQATCLPLHDCTNNKRSSDSEEVIVANNNGRQQEEDDFASFASHHHNNNNHYYVGTDLSMGLLPASSSSSPDEEALSCKRPKISSNNISSSSVQLPVFIKPFSSDHAEMEIGVHNKPKIMEDLDLELRLGKSQKVK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01502 228 Gene3D Classic Zinc Finger 58 127 - -
Accr3g01502 228 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 88 IPR013087 -
Accr3g01502 228 Pfam C2H2-type zinc finger 61 85 - -
Accr3g01502 228 PANTHER OS07G0101800 PROTEIN 33 224 - -
Accr3g01502 228 SUPERFAMILY beta-beta-alpha zinc fingers 58 87 IPR036236 -
Accr3g01502 228 SMART c2h2final6 61 83 IPR013087 -
Accr3g01502 228 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01502 Accr-Chr3 17636776 17637462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01502 39 222 C2H2 Transcription Factor Family AT5G06070 40.758 3.73e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr3g01502 zf-C2H2_6 1.2e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01502 - - lang:109329510 163.696