Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01501 ATGGCTGGGATTTGCTGTGGTGTTGTTGGAGAAGGTGAGACTCCGACTCCGATTGAGCCGGGACGATCTTCTCGGCGCCGGAGGTTGGATATCATGCCCTTGAAGCTTATGGCTGACGTGGCTGTGCCGCCGCCTGAGACCTGCAGCCTGAAGCGCCAAAAGCTGGATCTCTGTACTAATTCTTCCACACAACCAAAAGACTGCGTAAACGCAGTTCAGAATTGTGAATCTAGTGGTATTAAGAAAGAAGAGGCACAAAATGAGGAGGAACAGAAAAAGGACAAATCTCCGTCGACGGTTTCTTCGTTAAATTCAACTGATACAAAAGAGTGTGAGAATGAGGATATTCGTGTGTGTCCGAAGTTTGGGGTTACATCGGTTTGTGGTAGAAGGAGGGATATGGAAGATGCAGTTTCAGTTCGTCCTTCGTTCTGCCAAGAACAGGGTCAAAATCGGAAAGAGTTTCACTACTTTGGTGTGTTCGACGGCCACGGTTGCTCTCATGTAGCGACGATCTGTAAAGAAAGGCTGCATGAGATTGTGAAGGAAGAGGTCGGGGGAGCACGAGAGGATTTGGAATGGAAGTCCACAATGGAACAGAGTTTTGCTCGCATGGACGAGGAGGTACAGAACTGGAGCCAGAGCAACCAGAGCTCCACTTGCAGGTGCGAGCTTCAGACACCTCACTGCGACGCTGTCGGATCTACCGCGGTTGTTGCCGTCGTTACACCGGACAAGATCATAGTCTCCAACTGTGGCGACTCCCGAGCCGTTCTCTGTCGAAACGGCGTCGCCGTCCCTCTTTCGTCCGATCACAAGCCTGACCGACCTGACGAGTTGCTCCGAGTTCAAGCCGCCGGAGGACGGGTCATTTACTGGGATGGTCCTAGGGTTCTCGGAGTTTTGGCGATGTCCAGAGCCATAGGCGACAATTATCTTAAACCGTACGTTATATCGGAGCCGGAGGTGACGGTGACGGAGCGAACAGACGAGGACGAGTGTCTGATACTTGCGAGTGACGGCCTATGGGACGTGGTGTCAAACGATACGGCATGCGGGGTGGTGCGGATGTGCCTGAAGGTGCAGAAACCGCCGTCTCCGCCGGGCTCTCCAGGAAGCGACATGGCAGTGTGCTCCGCCGCGGATGGGTCGGACAAGGCGTGCTCGGACGCATCCATTCTGTTGACTAAGCTAGCTTTGGCCCGGCATAGTACGGACAACGTGAGCGTGGTGGTGGTGGATTTGAGGAGAGAGAAACCGGAATGTAACTCCGACGAGGGGAACAACAATAAGTAG 1296 0.5347 MAGICCGVVGEGETPTPIEPGRSSRRRRLDIMPLKLMADVAVPPPETCSLKRQKLDLCTNSSTQPKDCVNAVQNCESSGIKKEEAQNEEEQKKDKSPSTVSSLNSTDTKECENEDIRVCPKFGVTSVCGRRRDMEDAVSVRPSFCQEQGQNRKEFHYFGVFDGHGCSHVATICKERLHEIVKEEVGGAREDLEWKSTMEQSFARMDEEVQNWSQSNQSSTCRCELQTPHCDAVGSTAVVAVVTPDKIIVSNCGDSRAVLCRNGVAVPLSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTDEDECLILASDGLWDVVSNDTACGVVRMCLKVQKPPSPPGSPGSDMAVCSAADGSDKACSDASILLTKLALARHSTDNVSVVVVDLRREKPECNSDEGNNNK 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01501 431 MobiDBLite consensus disorder prediction 81 96 - -
Accr3g01501 431 Pfam Protein phosphatase 2C 122 387 IPR001932 -
Accr3g01501 431 SUPERFAMILY PP2C-like 118 416 IPR036457 -
Accr3g01501 431 Gene3D - 116 422 IPR036457 -
Accr3g01501 431 CDD PP2Cc 121 415 IPR001932 -
Accr3g01501 431 MobiDBLite consensus disorder prediction 80 107 - -
Accr3g01501 431 SMART PP2C_4 107 413 IPR001932 -
Accr3g01501 431 ProSitePatterns PPM-type phosphatase domain signature. 157 165 IPR000222 GO:0043169
Accr3g01501 431 PANTHER PROTEIN PHOSPHATASE 93 415 IPR015655 GO:0004722|GO:0006470
Accr3g01501 431 ProSiteProfiles PPM-type phosphatase domain profile. 121 415 IPR001932 -
Accr3g01501 431 FunFam Protein phosphatase 2C 37 116 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01501 Accr-Chr3 17597704 17599427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01501 1 390 PP2C-type Phosphatase Gene Family AT3G11410 58.250 6.28e-147 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01501 K14497 - gmx:100796161 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01501 3 17597704 17599427 Accr3g01501 3 17597704 17599427 CCT
Accr3g01501 3 17597704 17599427 Accr3g01501 3 17597704 17599427 ECH