Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01495 ATGAAGGCACTCATTCTGGTTGGAGGCTTTGGAACAAGACTGAGGCCATTGACACTCAGTGTCCCCAAGCCTCTTGTTGATTTTGCTAACAAACCCATGATCCTGCATCAGATAGAGGCTCTTAAGGCTATTGGAGTTGATGAAGTGGTATTAGCCATCAATTACCAACCAGAGGTGATGTTGAACTTCTTGAAGGAATACGAGGCAAAGCTAGGCATCAAGATCACGTGTTCACAAGAAACTGAACCATTGGGTACAGCAGGTCCTCTGGCTCTTGCCAGGGATAAGCTGTTGGATGGTTCTGGCGAGCCATTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTACCCACTTAAGGAGATGGTTGAATTTCATAAATCCCACGGAGGAGAGGCATCCATAATGGTGACAAAGGTTGATGAGCCATCCAAATATGGTGTGGTTGTCACGGAGGAGGCCACAGGGAAGGTTGAGAAATTTGTGGAAAAGCCTAAGTTGTTTGTTGGGAACAAAATCAATGCTGGAATTTACTTACTGAGCCCCTCAGTTCTGGATCGCATCGAGCTAAGGCCCACATCTATCGAGAAAGAGGTGTTTCCAAAGATTGCAGCAGAGCAAAAACTATTTGCAATGGTCCTTCCTGGGTTTTGGATGGACATTGGACAGCCAAGGGACTATATTACTGGTCTGAGACTCTACCTGGATTCATTGAAGAAAAAATCTTCCTCCAAGTTAGCTACTGGTCCTCACATTGTGGGAAACGTCATAGTAGATGAGACCGCCAAAATTGGTGAAGGATGTCTCATTGGACCTGATGTTGCTATAGGTCCTGGCTGCATAGTTGAGTCGGGTGTTCGTCTTTCCCGCTGCACTGTAATGCGAGGGGTCCGGATTAAGAAACATGCTTGCATTTCCAGCAGTATCATTGGTTGGCATTCCACTGTAGGACAATGGGCTCGTGTGGAGAACATGACTATCCTTGGAGAAGATGTCCATGTGTGTGATGAAATTTACAGCAATGGTGGTGTTGTTCTGCCTCACAAGGAGATCAAGTCCAGCATTTGGAAACCAGAGATCGTTATGTGA 1086 0.4567 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAIGVDEVVLAINYQPEVMLNFLKEYEAKLGIKITCSQETEPLGTAGPLALARDKLLDGSGEPFFVLNSDVISEYPLKEMVEFHKSHGGEASIMVTKVDEPSKYGVVVTEEATGKVEKFVEKPKLFVGNKINAGIYLLSPSVLDRIELRPTSIEKEVFPKIAAEQKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLKKKSSSKLATGPHIVGNVIVDETAKIGEGCLIGPDVAIGPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSIWKPEIVM 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01495 361 FunFam mannose-1-phosphate guanyltransferase beta 1 232 - -
Accr3g01495 361 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 233 IPR029044 -
Accr3g01495 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 312 IPR029044 -
Accr3g01495 361 Gene3D Hexapeptide repeat proteins 235 355 - -
Accr3g01495 361 Pfam Nucleotidyl transferase 2 229 IPR005835 GO:0009058
Accr3g01495 361 Pfam Bacterial transferase hexapeptide (six repeats) 261 295 IPR001451 -
Accr3g01495 361 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 360 - -
Accr3g01495 361 CDD M1P_guanylylT_B_like_N 1 234 IPR045233 GO:0004475|GO:0005525|GO:0009298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01495 Accr-Chr3 17478271 17480050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01495 1 147 Eukaryotic Initiation Factors Gene Family AT4G18300 23.226 6.36e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01495 K00966 - csin:114292478 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01495 3 17478271 17480050 Accr3g01495 3 17478271 17480050 CCT
Accr3g01495 3 17478271 17480050 Accr3g01495 3 17478271 17480050 ECH