Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01440 ATGCCTTCTTCTTTTTCTTCATCGACCCTCACTGTACTCTCTAAATGCACTGTGTACCCTAACCAGAAGTCCACCATCTCAGACCTCAAGCTCTCCATCTCCGACCTTGGCATGCTCTCTTGTCACTACATCCAAAAAGGTTGTCTCTTTTCTCTCCCTTCTTTCCCCTTTCACTCTCTCATCCCTCACCTCAAGTCCTCTCTCTCCCTCACTCTCTCTCACTTCCCTCCCCTCGCCGGCCGCCTCACTACCGATTCCCACGGCTACGTTTACATAACCTGCAACGATGCCGGTGTAGACTTCCTCCATGCCACCGACACCGGATACTCCGTCCGCGACCTCTTGTCCCCACCCGATGTCCCAGGTTCGTTTAAGCACTTCTTCACCTTCGACAAAAAAGTCAGTTACACCGGCCACTTAAGCCCACTCTTGGCCGTTCAGGTCACCGAGCTCGCTGACGGCGTCTTTATCGGCTGCGCTATGAACCACGCCATCGCTGACGGCACGTCGTTCTGGAATTTCTTCAATACCTTCGCGGAAATATGCAGAGAGGCCACCAATAAAATCTCCAACGTCCCCGATTTCCGTCGGGATTCGATTCTAATATCCAAAGCGGTGCTCGAGTTTCCGGAAGGTGGGCCCAAGATCACGTTCAACCCTGACGAGCCATTAAGGGAGAGAATTTTCAGCTTCAGCAAAGAAGCAATAAAAAAACTGAAAGCCACCGTGAACAGCGAGAAACTCACAATTAACGGCGAGGTTAACGCCGTCGAGTTAATAGGGAAGCAAAGCAACGATAGTTACCATAATAACAACAAAGGCAAAGTTAACGACGAGATATCGTCGTTTCAGTCACTTTGCGCGCTGCTATGGCGATGCGTGACACGCGCGAGGAAGTTGCATCCGTCGAAAACGACGGCGTTTAAGATGGCAGTGAACTGTCGCTTGAGGTTAGAGCCTAAATTGGATCCGTACTATTTCGGGAACGCGATTCAGAGCATACCCACGTATGCCACGGCAGAGGACGTCGTGTGCAGGGGACTACGGTGGTGCGCGGAGGAGCTGAGCAAGAACGTGAAGACGCATGATGACGCTATGGTGAGGAGGCTCGTAGAGGACTGGGAGAGAAATCCGAGGTGCTTCCCGCTGGGAAATCCTGACGGCACATCGCTGACGATGGGGAGCTCGCCGAGATTTCCGATGTATGATAACGACTTTGGGTGGGGGAGGCCGGTGGCGGTTCGGAGCGGCGGAGCTAACAAGTTTAACGGGAAGATATCGGCGTTTCCGGGGAGGGAAGGAGGTGGGAGTGTGGACTTGGAGGTGTTGTTGCCGCCGGAGACGATGGAGGGGCTGGAATCGGACCCAGAGTTCATGGCGTACGCATCGAGTTCTTGGTGCAATTGA 1407 0.5323 MPSSFSSSTLTVLSKCTVYPNQKSTISDLKLSISDLGMLSCHYIQKGCLFSLPSFPFHSLIPHLKSSLSLTLSHFPPLAGRLTTDSHGYVYITCNDAGVDFLHATDTGYSVRDLLSPPDVPGSFKHFFTFDKKVSYTGHLSPLLAVQVTELADGVFIGCAMNHAIADGTSFWNFFNTFAEICREATNKISNVPDFRRDSILISKAVLEFPEGGPKITFNPDEPLRERIFSFSKEAIKKLKATVNSEKLTINGEVNAVELIGKQSNDSYHNNNKGKVNDEISSFQSLCALLWRCVTRARKLHPSKTTAFKMAVNCRLRLEPKLDPYYFGNAIQSIPTYATAEDVVCRGLRWCAEELSKNVKTHDDAMVRRLVEDWERNPRCFPLGNPDGTSLTMGSSPRFPMYDNDFGWGRPVAVRSGGANKFNGKISAFPGREGGGSVDLEVLLPPETMEGLESDPEFMAYASSSWCN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01440 468 Gene3D - 212 454 IPR023213 -
Accr3g01440 468 Gene3D - 10 208 IPR023213 -
Accr3g01440 468 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 12 459 - -
Accr3g01440 468 SUPERFAMILY CoA-dependent acyltransferases 60 187 - -
Accr3g01440 468 Pfam Transferase family 10 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01440 Accr-Chr3 16595572 16596978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01440 10 453 Monolignol Biosynthesis Gene Families AT5G48930 27.623 2.10e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01440 - - gmx:100779616 675.626