Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01433 ATGGTTGGGAAAGCCACTAAGGCCGAGAAGAAGATCGCTTATGATGCCAAATTGTGCCAGCTTCTGGAGGATTACACTCAGATCCTTGTGGTGGAGGCCGACAACGTTGGATCCAACCAGCTTCAAAACATCAGGAAGGGTCTGCGTGGTGACTCGGTGGTGCTCATGGGCAAGAACACCATGATGAAGCGCTCTGTTAGGATGCATGCCGAAAAGACCGGCAACAATGTCTTCCTCAACCTTATCCCTCTGCTTCAGGGCAATGTGGGGTTAATATTCACTAAAGGAGACCTGAAGGAGGTTAGCGAGGAGGTTGCCAAGTACAAGGTTGGAGCTCCTGCCCGTGTTGGTTTGGTTGCTCCCATTGATGTCGTTGTTCCTCCTGGCAACACAGGGCTTGATCCCTCTCAGACCTCTTTCTTCCAGGTGCTCAATATCCCCACTAAGATTAACAAGGGTACTGTCGAAATTATCACCCCTGTGGAACTTATTAAGAAGGGTGAAAAGGTTGGCTCCTCAGAGGCTGCTCTGCTTGCAAAACTTGGGATAAGGCCCTTCTCTTATGGGCTTGTGGTTTCCTCTGTGTATGATAATGGTTCAGTGTTCAGCCCTGAGGTTCTTGATCTCACTGAGGAGGATCTCATTGAGAAATTTGCTATTGGGGTTAGCCAGGTGACGTCCATTGCTTTGGCCGCCTCATACCCAACAATTGCGGCTGCACCACACATGTTCACCAATGCCTACAAAAACGTTTTGTCTGTTTCAGTGGAAACTGCCTACTCTTACCCTCAGGCAGAAAAGGTTAAGGAGTACCTAGAGGATCCCAGCAAATTTGCCGTTGCTGCTGTTGCGTCAGCTCCTGTTGCGGATTCAGGTGCTGCCCCAGCTGCTGCCGCAGAGGAGAAGAAGGATGAGCCAGCTGAAGAATCTGATGACGACATTGGCATGGGTTTGTTCGGTGAAGATGAGTGA 972 0.499 MVGKATKAEKKIAYDAKLCQLLEDYTQILVVEADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNVFLNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLGIRPFSYGLVVSSVYDNGSVFSPEVLDLTEEDLIEKFAIGVSQVTSIALAASYPTIAAAPHMFTNAYKNVLSVSVETAYSYPQAEKVKEYLEDPSKFAVAAVASAPVADSGAAPAAAAEEKKDEPAEESDDDIGMGLFGEDE 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01433 323 Gene3D - 6 209 IPR043141 -
Accr3g01433 323 CDD Ribosomal_P0_L10e 9 185 - -
Accr3g01433 323 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 4 302 - -
Accr3g01433 323 Pfam Ribosomal protein L10 7 108 IPR001790 -
Accr3g01433 323 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Accr3g01433 323 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Accr3g01433 323 MobiDBLite consensus disorder prediction 288 323 - -
Accr3g01433 323 FunFam 60S acidic ribosomal protein P0 113 186 - -
Accr3g01433 323 Pfam 60s Acidic ribosomal protein 234 319 - -
Accr3g01433 323 PIRSF L10E 1 320 IPR030670 GO:0042254
Accr3g01433 323 MobiDBLite consensus disorder prediction 305 323 - -
Accr3g01433 323 Gene3D - 114 185 IPR043164 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01433 Accr-Chr3 16446679 16448920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01433 1 320 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 80.685 0.0 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01433 K02941 - jre:108980032 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01433 3 16446679 16448920 Accr3g01433 3 16446679 16448920 ECH